Gene Bamb_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2088 
SymbolgltX 
ID4309384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2291929 
End bp2293338 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content68% 
IMG OID638149912 
Productglutamyl-tRNA synthetase 
Protein accessionYP_773978 
Protein GI115352139 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.51116e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGTC CTGTCCGTAC CCGCTTCGCG CCGAGTCCCA CCGGCTTCAT CCACCTCGGC 
AACATCCGCT CCGCGCTCTA TCCGTGGGCG TTCGCCCGCA AGATGAAGGG CACGTTCGTG
CTGCGTATCG AGGATACCGA CGTCGAGCGT TCGTCGCAGG AAGCCGTCGA CGCGATCCTC
GAAGGGATGC AGTGGCTCGG CCTCGATTTC GACGAAGGCC CGATCTACCA GATGCAGCGG
ATGGACCGCT ATCGCGAGGT GCTCGCGCAG ATGCTCGAGC AGGGCCTCGC GTACCCGTGC
TACATGTCGG CCGAGGAGCT CGACGCGCTG CGCGAACGCC AGCGCGAGGC CGGCCTGAAG
CCGCGCTACG ACGGCACGTG GCGTCCGGAG CCGGGCAAGG TGCTGCCCGA GCCGCCGGCC
GGCGTGAAGC CGGTGCTGCG TTTCCGCAAC CCGCTGACCG GCACGGTCGT GTGGGACGAC
GCGGTGAAGG GCCGTGTCGA GATCTCGAAC GAGGAACTCG ACGACCTCGT GATTGCGCGC
CCGGACGGCA CGCCGATCTA CAACTTCTGC GTCGTCGTGG ACGACATGGA CATGAACATC
ACGCACGTGA TCCGTGGCGA CGACCACGTG AACAACACGC CGCGCCAGAT CAACATCCTG
CGCGCGCTCG GCGGCGAGCC GCCCGTCTAT GCGCACCTGC CGACCGTGCT GAACGAGCAG
GGCGAGAAGA TGAGCAAGCG GCATGGCGCG ATGAGCGTGA TGGCTTACCG TGACGCCGGC
TTCCTGCCGG AGGCCGTCGT CAACTATCTC GCGCGTCTGG GCTGGTCGCA CGGCGACGCT
GAAATCTTCA CGCGCGAACA GTTCGTCGAA TGGTTCGACC TCGAGCATCT CGGCAAGTCG
CCCGCGCAGT ACGACCACAG CAAGCTGAGC TGGCTGAACG CCCACTACAT CAAGGAAGCC
GACAACGCGC GCCTCGCCGC GCTGGCGAAG CCGTTCCTCG ACGCGCTCGG CATCGAGGAG
GCGGCGATCG CGACGGGCCC CGCGCTCGAC GCGGTGGTCG GCCTGATGAA GGATCGCGCG
ACGACGGTCA AGGAGATCGC CGAAGGCGCC GCGATGTTCT ACCGTGTGCC GGCGCCGGAC
GCCGACGCAC TCGCGCAGCA CGTGACCGAT GCGGTGCGTC CGGCGCTGGC CGACCTCGTC
GCCGCACTGA AGGCGGCCGA CTGGACGAAG GAAGCCGTGT CCGCGGCGCT GAAGGCGACG
CTCGGCACGC ACAAGCTAAA GATGCCGCAG CTCGCGATGC CGGTGCGCCT GCTGGTGGCG
GGCACGACGC ATACGCCGTC GATCGACGCG GTGCTCGTGC TGTTCGGTCG CGACGTCGTG
GTGTCGCGTA TCGAGGCCGC GCTGGCCTGA
 
Protein sequence
MTRPVRTRFA PSPTGFIHLG NIRSALYPWA FARKMKGTFV LRIEDTDVER SSQEAVDAIL 
EGMQWLGLDF DEGPIYQMQR MDRYREVLAQ MLEQGLAYPC YMSAEELDAL RERQREAGLK
PRYDGTWRPE PGKVLPEPPA GVKPVLRFRN PLTGTVVWDD AVKGRVEISN EELDDLVIAR
PDGTPIYNFC VVVDDMDMNI THVIRGDDHV NNTPRQINIL RALGGEPPVY AHLPTVLNEQ
GEKMSKRHGA MSVMAYRDAG FLPEAVVNYL ARLGWSHGDA EIFTREQFVE WFDLEHLGKS
PAQYDHSKLS WLNAHYIKEA DNARLAALAK PFLDALGIEE AAIATGPALD AVVGLMKDRA
TTVKEIAEGA AMFYRVPAPD ADALAQHVTD AVRPALADLV AALKAADWTK EAVSAALKAT
LGTHKLKMPQ LAMPVRLLVA GTTHTPSIDA VLVLFGRDVV VSRIEAALA