| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2061 |
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| Symbol | |
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| ID | 4311634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2262478 |
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| End bp | 2263641 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638149878 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_773951 |
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| Protein GI | 115352112 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGGTG CCGGTACACC CGCTGCCAGC CTCAAACCGA TCAGCTTCGG CATCGGCGAG
CCCAAGCACC CGACGCCGGC GCTGATCCGC GACGCCGTGG TGGCCGCGCT CGACGGTCTC
GCGTCGTACC CGGCCACGGC CGGCTCGGAC GCGCTGCGCA CGTCGATCGC GCACTGGCTC
GAACGCCGCT ACGGGCTGCC GGCGCTCGAT CCGGCCACGC AAGTGCTGCC CGTGTCGGGG
TCGCGCGAGG CGCTGTTCTC GCTCGCGCAG ACGGTGATCG ACTCGCGCGC GAGCGCGGAC
GGCAAGAAGG CGATCGTACT CTGTCCGAAT CCGTTCTATC AAATTTACGA AGGCGCGGCG
CTGCTGGCCG GTGCCGAACC CTATTTCGCG AACAGCGACC CGGCGCGCAA CTTCGCTTGT
GACTATGCGG CCGTGCCCGA CGAGGTGTGG GCGCGCACCC AGCTGCTGTA CGTGTGCTCG
CCGGGCAACC CGACGGGCGC CGTGCTGACG CTCGACGACT GGCGCGAGCT GTTCGCGCTG
TCCGACCGCC ACGGTTTCGT GATCGCGTCC GACGAGTGCT ATTCGGAAAT CTATTTCGAC
GAAGCGGCGC CGCCGCTCGG CGGCCTCGAG GCCGCGCACC GCCTCGGCCG CGGCTTCGAA
CGGCTCGTGA TGCTGTCGAG CCTGTCCAAG CGCTCGAACG TGCCGGGCAT GCGCTCGGGT
TTCGTCGCCG GCGACGCCGC GCTGCTCAAG AAATTCCTGC TGTATCGCAC GTACCACGGT
GCGGCGCTGT CGCCGGTCTG GCAGCACGCG AGCATCGCCG CGTGGAACGA CGAGGCGCAC
GTGCGCGAGA ACCGCGCGCT GTACCTGCAG AAGTTCAACA CGGTCACGCC GATGCTGGCC
GACGTGATCG ACGTGAAGCT GCCCGACGCC GCGTTCTACC TGTGGGCCAA CGTCGCGCGC
ACCGGGCTGT CGGACACCGA GTTCGCCCGC CGCCTGTACG CCGACTATAA TGTGACGGTT
CTGCCCGGCT CGTACCTGGC GCGCGACGCG CACGGCACGA ATCCAGGCCG CGATTTCATC
CGGATCGCGC TCGTCGCGGG CACCCCCGAA TGCGTCGAGG GCGCGCAACG CATCGTCGAT
TTCTGCCAAG CTCTCGCGCG GTAA
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| Protein sequence | MPGAGTPAAS LKPISFGIGE PKHPTPALIR DAVVAALDGL ASYPATAGSD ALRTSIAHWL
ERRYGLPALD PATQVLPVSG SREALFSLAQ TVIDSRASAD GKKAIVLCPN PFYQIYEGAA
LLAGAEPYFA NSDPARNFAC DYAAVPDEVW ARTQLLYVCS PGNPTGAVLT LDDWRELFAL
SDRHGFVIAS DECYSEIYFD EAAPPLGGLE AAHRLGRGFE RLVMLSSLSK RSNVPGMRSG
FVAGDAALLK KFLLYRTYHG AALSPVWQHA SIAAWNDEAH VRENRALYLQ KFNTVTPMLA
DVIDVKLPDA AFYLWANVAR TGLSDTEFAR RLYADYNVTV LPGSYLARDA HGTNPGRDFI
RIALVAGTPE CVEGAQRIVD FCQALAR
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