| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2057 |
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| Symbol | |
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| ID | 4311630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2253998 |
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| End bp | 2256073 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638149874 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_773947 |
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| Protein GI | 115352108 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.258192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCGAA CCCAAGCCGA ACCGCCAGCC AGCCAGCCCG ACGCGCGTGC CGCGTGGCTG
CGCGACCAAC TCGAGCGGGC GAATTACGCC TATTACGTGC TCGACCAGCC GGATCTGCCC
GACGCCGAAT ACGATCGACT GTTCGGCGAG CTGCAGCAAC TCGAAACCGA TCATCCCGAC
CTCGTGACGC CCGACTCGCC GACGCAGCGC GTCGGCGGCG AAGTGGCGGG CGGTTTCACG
CCGGTCGTCC ATGATGCGCC GATGCTGTCG CTGAACAACG GCTTCGCCGA CGAGGACATC
GCCGCGTTCG ACAAGCGCGT CGCCGATGCG CTCGGCAAGA CGACCGATCT CGCCGGCTCG
GTGACGGACC CGGTCGAATA TGCGTGCGAG CTGAAGTTCG ACGGGCTGGC AATCTCGCTG
CGCTACGAGC ACGGCGTGTT CGTGCAGGCG TCGACGCGCG GCGACGGCAC GACCGGCGAG
GACGTGACGG AGAACGTCCG CACGATCCGC TCGATCCCGC TGAAGCTGAA GGGCGCGCAC
GTGCCGGCCC TGCTCGACGT GCGCGGCGAG GTGCTGATGT TCAAGCGCGA TTTCGCACGC
CTGAACGAAC GCCAGCGCGC GGCCGAGCAG CGTGAATTCG CGAACCCGCG CAACGCGGCG
GCCGGCAGCC TGCGCCAGCT CGATCCGAAG ATCACCGCGC AGCGGCCGCT GTCGTTCTTC
GCGTACGGGA TCGGCGTGCT CGACGGGATG CCGATGCCGG ACACGCACAG CGCACTGCTC
GACTGGTACG AGTCGTTCGG CCTGCCGGTG AACCGCGAGC GCGCGGTCGT GTACGGCGCC
GACGGCCTGC TCGGCTTCTT CCGCAAGGTC GGCGAGAAGC GCGAGTCGCT GCCGTACGAC
ATCGACGGCG TCGTCTACAA GGTGAACCGG CGCGACGAAC AGGATCGCCT CGGCTTCGTG
TCGCGCGCAC CGCGCTTCGC GCTCGCGCAC AAGTTTCCCG CACAGGAAGC GCTGACCAGG
CTCGTCGCGA TCGACGTGCA GGTCGGCCGC ACGGGTGCGA TCACGCCGGT CGCGCGGCTC
GAACCCGTGT TCGTCGGCGG CGCGACGGTG ACCAACGCGA CGCTGCACAA CGAGGACGAA
GTGCGCCGCA AGGACATCCG GATCGGCGAT ACCGTGATCG TGCGGCGCGC GGGCGACGTG
ATCCCCGAGG TCGTCGGCGC GCTGCTCGAT CGCCGGCCGG ACGATGCGGC CGAATTCGTG
ATGCCGACCG AATGCCCGGT GTGCGGTTCG AAGATCGAGC GGTTGCCGGA CGAGGCGATC
GCGCGCTGCA CCGGCGGCCT GTTCTGCCCG GCGCAGCGCA AGCAGGCGCT GTGGCACTTC
GCGCAGCGTC GCGCGCTCGA CATCGACGGG CTCGGCGAGA AGATCATCGA TCAGCTCGTC
GAACTGAATC TCGTGCGCAC GCCGGCCGAC TTGTTCAATC TCGGTTTCGC GACGCTCGCG
GAACTCGACC GGTTCGCCGA GAAGTCCGCA CAGAATTTGC TCGACTCGCT CGAGAAGGCG
AAGCACACGA CGCTCGCGCG CTTCATCTAC GGGCTCGGGA TCCGCCATGT CGGTGAATCG
ACCGCGAAGG ATCTCGCGAA GCACTTCGGG TCGCTGACCC CGATCATGGA CGCGTCGATC
GAGGAACTGC TCGAAGTCAA CGACGTCGGG CCGATCGTCG CCGAGTCGAT CCACCAGTTC
TTCGCGGAAG AACACAACCG CACCGTGATC GAGCAACTGC GCGCGCCCGG CAAGGTCACG
TGGGCCGAAG GCCCGCCCGC GCCGAGGGCG CCGCAGGGCG TGCTGGCCGG CAAGACGGTC
GTGCTGACGG GCACGCTGCC GAATCTCACC CGCGACGCGG CGAAGGAGAT GCTCGAAGCG
GCGGGCGCGA AAGTCGCGGG CTCGGTATCG AAGAAGACGG ATTACGTGGT CGCGGGCGCC
GACGCCGGCA GCAAGCTCGC GAAGGCCGAG GAACTCGGCA TCCCCGTACT GGACGAAGAC
GGACTGCACC AACTCCTGGA GGGCAACACC CCATGA
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| Protein sequence | MARTQAEPPA SQPDARAAWL RDQLERANYA YYVLDQPDLP DAEYDRLFGE LQQLETDHPD
LVTPDSPTQR VGGEVAGGFT PVVHDAPMLS LNNGFADEDI AAFDKRVADA LGKTTDLAGS
VTDPVEYACE LKFDGLAISL RYEHGVFVQA STRGDGTTGE DVTENVRTIR SIPLKLKGAH
VPALLDVRGE VLMFKRDFAR LNERQRAAEQ REFANPRNAA AGSLRQLDPK ITAQRPLSFF
AYGIGVLDGM PMPDTHSALL DWYESFGLPV NRERAVVYGA DGLLGFFRKV GEKRESLPYD
IDGVVYKVNR RDEQDRLGFV SRAPRFALAH KFPAQEALTR LVAIDVQVGR TGAITPVARL
EPVFVGGATV TNATLHNEDE VRRKDIRIGD TVIVRRAGDV IPEVVGALLD RRPDDAAEFV
MPTECPVCGS KIERLPDEAI ARCTGGLFCP AQRKQALWHF AQRRALDIDG LGEKIIDQLV
ELNLVRTPAD LFNLGFATLA ELDRFAEKSA QNLLDSLEKA KHTTLARFIY GLGIRHVGES
TAKDLAKHFG SLTPIMDASI EELLEVNDVG PIVAESIHQF FAEEHNRTVI EQLRAPGKVT
WAEGPPAPRA PQGVLAGKTV VLTGTLPNLT RDAAKEMLEA AGAKVAGSVS KKTDYVVAGA
DAGSKLAKAE ELGIPVLDED GLHQLLEGNT P
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