Gene Bamb_2046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2046 
Symbol 
ID4311619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2241267 
End bp2242463 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content68% 
IMG OID638149863 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_773936 
Protein GI115352097 
COG category[I] Lipid transport and metabolism 
COG ID[COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 
TIGRFAM ID[TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAC GTCTGACACT GCTCGGTTCC ACGGGCTCGA TCGGAGACAG CACGCTCGAC 
GTGGTCGCCC GCCATCCCGA GCGTTTCTCG GTCTATGCGT TGACCGCGCA CCGCAACGGC
GACAAGCTCG TCGAGCAGTG CCTGCGCTTC GCGCCCGAAG TCGCGGTGGT CGGCGATGCG
AACACGGCGG CGCACGTCGA GGCAAAGCTG CGCGCGGCGG GCAGCAAGAC CATCGTGCTG
TACGGGCCGC AAGCGCTCGT CGACGTGTCG AAGAGCGACG GCTGCGACAC CGTCGTCGCG
GCGATCGTCG GCGCGGCCGG CCTGGCGCCG AGCCTCGCGG CCGCGCGCGC CGGCAAGCGC
ATCCTGTTGG CGAACAAGGA ATCGCTCGTG ATGTCGGGCG CGATCTTCAT GGACGCCGTG
CGCGACCATG GCGCGATCCT GCTGCCGGTC GACAGCGAAC ACAACGCGAT CTTCCAGTGC
ATGCCGCGCG ACGAGAACGA GCACGGCGGG ATCTCGAAGA TCATCCTGAC CGCGTCGGGC
GGCCCGTTCC GCACGCGCGA GCCGGCCACG CTCGCCGACG TGACGCCGGA CGAAGCCTGC
AAGCACCCGA ACTGGGTGAT GGGCCGCAAG ATCTCGGTCG ATTCCGCGAC GATGATGAAC
AAGGGCCTCG AGGTGATCGA GGCGCACTGG ATCTTCGGTT TGGCCGGCGA CCGGATCGAC
GTGCTGATTC ACCCGCAGAG CGTGATCCAT TCGCTCGTGT CGTACCGCGA CGGCTCGGTG
CTCGCCCAGC TCGGCAACCC CGACATGCGC ACGCCGATCG CGCACGCGCT GGCGTTCCCG
GAGCGCGTCG ACGCGGGCGT CGACCAGCTC GACCTCGCGC AGATCGTGCA GCTGTCGTTC
GAAAAACCCG ATTACACGCG CTTCCCGTGC CTCGCGCTCG CGCTGAAGGC GCTTGAAGAG
GGCGGTATCG CGAGCGCCGC GTTGAACGCG GCGAACGAAA TCGCGGTCGA AGCGTTTCTC
GAGCGCCGGA TCGGCTTCAT GGCGATCGCG GCCACCGTCG ACGCGGTGCT CAACGCGCTG
CCGAACCGCA GCCCGAACGG GCTCGACGAC GTCCTTGCGG CGGATGCCGA GGCACGCCGC
CTCGCCGCCG AGATCATTGC GAAAGCGCCT GCGCCCCGCG TGGAGCGTAC TGTCTGA
 
Protein sequence
MQKRLTLLGS TGSIGDSTLD VVARHPERFS VYALTAHRNG DKLVEQCLRF APEVAVVGDA 
NTAAHVEAKL RAAGSKTIVL YGPQALVDVS KSDGCDTVVA AIVGAAGLAP SLAAARAGKR
ILLANKESLV MSGAIFMDAV RDHGAILLPV DSEHNAIFQC MPRDENEHGG ISKIILTASG
GPFRTREPAT LADVTPDEAC KHPNWVMGRK ISVDSATMMN KGLEVIEAHW IFGLAGDRID
VLIHPQSVIH SLVSYRDGSV LAQLGNPDMR TPIAHALAFP ERVDAGVDQL DLAQIVQLSF
EKPDYTRFPC LALALKALEE GGIASAALNA ANEIAVEAFL ERRIGFMAIA ATVDAVLNAL
PNRSPNGLDD VLAADAEARR LAAEIIAKAP APRVERTV