Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2046 |
Symbol | |
ID | 4311619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2241267 |
End bp | 2242463 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638149863 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_773936 |
Protein GI | 115352097 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAAC GTCTGACACT GCTCGGTTCC ACGGGCTCGA TCGGAGACAG CACGCTCGAC GTGGTCGCCC GCCATCCCGA GCGTTTCTCG GTCTATGCGT TGACCGCGCA CCGCAACGGC GACAAGCTCG TCGAGCAGTG CCTGCGCTTC GCGCCCGAAG TCGCGGTGGT CGGCGATGCG AACACGGCGG CGCACGTCGA GGCAAAGCTG CGCGCGGCGG GCAGCAAGAC CATCGTGCTG TACGGGCCGC AAGCGCTCGT CGACGTGTCG AAGAGCGACG GCTGCGACAC CGTCGTCGCG GCGATCGTCG GCGCGGCCGG CCTGGCGCCG AGCCTCGCGG CCGCGCGCGC CGGCAAGCGC ATCCTGTTGG CGAACAAGGA ATCGCTCGTG ATGTCGGGCG CGATCTTCAT GGACGCCGTG CGCGACCATG GCGCGATCCT GCTGCCGGTC GACAGCGAAC ACAACGCGAT CTTCCAGTGC ATGCCGCGCG ACGAGAACGA GCACGGCGGG ATCTCGAAGA TCATCCTGAC CGCGTCGGGC GGCCCGTTCC GCACGCGCGA GCCGGCCACG CTCGCCGACG TGACGCCGGA CGAAGCCTGC AAGCACCCGA ACTGGGTGAT GGGCCGCAAG ATCTCGGTCG ATTCCGCGAC GATGATGAAC AAGGGCCTCG AGGTGATCGA GGCGCACTGG ATCTTCGGTT TGGCCGGCGA CCGGATCGAC GTGCTGATTC ACCCGCAGAG CGTGATCCAT TCGCTCGTGT CGTACCGCGA CGGCTCGGTG CTCGCCCAGC TCGGCAACCC CGACATGCGC ACGCCGATCG CGCACGCGCT GGCGTTCCCG GAGCGCGTCG ACGCGGGCGT CGACCAGCTC GACCTCGCGC AGATCGTGCA GCTGTCGTTC GAAAAACCCG ATTACACGCG CTTCCCGTGC CTCGCGCTCG CGCTGAAGGC GCTTGAAGAG GGCGGTATCG CGAGCGCCGC GTTGAACGCG GCGAACGAAA TCGCGGTCGA AGCGTTTCTC GAGCGCCGGA TCGGCTTCAT GGCGATCGCG GCCACCGTCG ACGCGGTGCT CAACGCGCTG CCGAACCGCA GCCCGAACGG GCTCGACGAC GTCCTTGCGG CGGATGCCGA GGCACGCCGC CTCGCCGCCG AGATCATTGC GAAAGCGCCT GCGCCCCGCG TGGAGCGTAC TGTCTGA
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Protein sequence | MQKRLTLLGS TGSIGDSTLD VVARHPERFS VYALTAHRNG DKLVEQCLRF APEVAVVGDA NTAAHVEAKL RAAGSKTIVL YGPQALVDVS KSDGCDTVVA AIVGAAGLAP SLAAARAGKR ILLANKESLV MSGAIFMDAV RDHGAILLPV DSEHNAIFQC MPRDENEHGG ISKIILTASG GPFRTREPAT LADVTPDEAC KHPNWVMGRK ISVDSATMMN KGLEVIEAHW IFGLAGDRID VLIHPQSVIH SLVSYRDGSV LAQLGNPDMR TPIAHALAFP ERVDAGVDQL DLAQIVQLSF EKPDYTRFPC LALALKALEE GGIASAALNA ANEIAVEAFL ERRIGFMAIA ATVDAVLNAL PNRSPNGLDD VLAADAEARR LAAEIIAKAP APRVERTV
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