| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2044 |
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| Symbol | |
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| ID | 4311617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2237496 |
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| End bp | 2239802 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638149861 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_773934 |
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| Protein GI | 115352095 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTCAAAC CTCATCGCTT TGTACCTAAG ACAGTTGCAG CGGCCGCGCT CGCCGCGCAC
GGCCTCGCGG CGCATGCAGC GGCACCGTTC GTGGTGCAAG ACATCAAGAT CGAGGGGTTG
CAGCGCGTCG AAGCGGGTTC GGTGTTTGCC TACCTGCCGA TCAAGCAGGG CGATACCTTC
ACCGACGACA AGGCATCCGA AGCAATTCGC GCGCTGTACG CGACGGGCTT CTTCAACGAC
GTGCGCATCG CGACCCAGGG CAACGTCGTG ATCGTGCAGG TGCAGGAGCG TCCGGCCATC
GCGTCGATCG ACTTCACCGG CACGAAGGAA TTCGACAAGG ACAACCTGAC GAAGGCGCTG
CGCGCGGTGG GTCTGGCCGA CGGCCGCTAC TACGACAAGG CGCTCGTCGA CAAGGCGGAG
CAGGAGCTCA AGCGTCAGTA CCTGACGCGC GGCTTCTACG CGGCCGAGGT CAAGACGACG
ATCACGCCGG TCGACGCGAA CCGCGTGTCG ATCCTGTTCG CGGTCGCCGA AGGCCCGAGC
GCGAAGATCC GCCAGATCAA CTTCATCGGC AACAAGGCGT TCAGCACCAG CAAGCTGCGC
GACGAGATGC AGCTGTCCAC GCCGAACTGG TTCTCCTGGT ACACGAAGAA CGACCTGTAC
TCGAAGGAAA AGCTCACGGG CGACCTCGAG GCCGTGCGCT CGTACTACCT GAACCGAGGC
TACCTCGAGT TCAACATCGA GTCGACCCAG GTGTCGATCT CGCCCGACAA GAAGGACATG
TACCTGACGG TCACGCTGCA CGAAGGCGAG CCGTACACGG TGTCGGGCAT CAAGCTGTCG
GGCAACCTGC TCGATCGCGA AGCCGAATTG ACCAAGCTGA TCAAGATCAA GCCGGGCGAT
CGCTTCTCGG CCGAAAAGCT GCAGCAAACG ACGAAGTCGA TCGTCGACAA GCTCGGCGAA
TACGGCTACG CATTCGCGAC CGTCAACGCG CAGCCGGACA TCGACCAGGC GAACCACAAG
GTGAACCTGA ACCTCGTCGT CGATCCGAGC CGTCGTGTGT ATGTGCGCCG TATCAACGTG
GTCGGCAACA CGCGTACGCG CGACGAAGTC GTGCGCCGCG AAATGCGCCA GCTCGAAAGC
TCGTGGTTCG ATTCGAACCG CCTCGCGCTG TCGAAGGATC GCGTGAACCG TCTCGGCTAC
TTCACCAACG TCGACGTGAC GACGGTGCCG GTCGAAGGCA CGAACGACCA GGTCGACGTG
ACCGTGAAGG TCGATGAAAA GCCGACCGGC GCGATCACGC TGGGCGCGGG CTTCTCGTCG
ACGGACAAGG TGGTGCTGTC GGCCGGCGTG TCGCAGGACA ACGTGTTCGG CTCGGGCACG
AGCCTGTCGG TGAACGTCAA CACCGCGAAG AGCTACCGCA CGCTGACCGT CACGCAGGTC
GACCCGTACT TCACGGTCGA CGGCATCAAG CGGATCACGG ACGTCTACTA CCGCACGTAC
CAGCCGCTCT ACTATTCGAC GAGCTCGAGC TTCCGGATCA TCAGCGCGGG CGGCAACCTG
AAGTTCGGCA TTCCGTTCTC GGAAGTCGAC ACCGTCTACT TCGGCGCGGG CTTCGAGCAG
AACCGTCTCG ATGTCGACTC GAACACGCCG CAGAGCTACC AGGATTACGT GAACCAGTTC
GGCCGCGTGT CGAACACGGT GCCGCTGACC GTCGCGTGGT CGCGCGACGC GCGTGACAGC
GCGCTGATCC CGAGCCGCGG CTACTTCACG CAAGCGAACG TCGAGTACGG CGTGCCGGTC
GGCAAGATCC AGTACTACAA GGCCGACCTG CAGGCGCAGT ACTACTATTC GTTCTCGCGC
GGCTTCATCC TGGGCATGAA CCTGCAAGGC GGCTACGGTA ACGGTATCGG CAACCCGTAC
CCGATCTTCA AGAACTACTA CGCGGGCGGT ATCGGCTCGG TGCGTGGCTA CGAGCCGAGC
TCGCTGGGCC CGCGCGACAC GAAGACGAAC GACCCGATCG GCGGTTCGAA GATGCTGGTC
GGCAACATCG AGCTGACGTT CCCGCTGCCG GGCACCGGCT ACGACCGCAC GCTGCGCGTG
TTCACGTTCC TCGACGGCGG TAACGTGTGG GGTAACGCGC CGGGCGGCAC GAGTACCGGC
GCGAACGGCC TGCGTTACGG CTACGGCGTG GGTCTCGCGT GGATCTCGCC GATCGGCCCG
CTGAAGCTGA GCCTCGGCTT CCCGCTGCAG AAGCATGAAG GCGACCAGTA CCAGAAATTC
CAGTTCCAGA TCGGGACGGC GTTCTGA
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| Protein sequence | MFKPHRFVPK TVAAAALAAH GLAAHAAAPF VVQDIKIEGL QRVEAGSVFA YLPIKQGDTF
TDDKASEAIR ALYATGFFND VRIATQGNVV IVQVQERPAI ASIDFTGTKE FDKDNLTKAL
RAVGLADGRY YDKALVDKAE QELKRQYLTR GFYAAEVKTT ITPVDANRVS ILFAVAEGPS
AKIRQINFIG NKAFSTSKLR DEMQLSTPNW FSWYTKNDLY SKEKLTGDLE AVRSYYLNRG
YLEFNIESTQ VSISPDKKDM YLTVTLHEGE PYTVSGIKLS GNLLDREAEL TKLIKIKPGD
RFSAEKLQQT TKSIVDKLGE YGYAFATVNA QPDIDQANHK VNLNLVVDPS RRVYVRRINV
VGNTRTRDEV VRREMRQLES SWFDSNRLAL SKDRVNRLGY FTNVDVTTVP VEGTNDQVDV
TVKVDEKPTG AITLGAGFSS TDKVVLSAGV SQDNVFGSGT SLSVNVNTAK SYRTLTVTQV
DPYFTVDGIK RITDVYYRTY QPLYYSTSSS FRIISAGGNL KFGIPFSEVD TVYFGAGFEQ
NRLDVDSNTP QSYQDYVNQF GRVSNTVPLT VAWSRDARDS ALIPSRGYFT QANVEYGVPV
GKIQYYKADL QAQYYYSFSR GFILGMNLQG GYGNGIGNPY PIFKNYYAGG IGSVRGYEPS
SLGPRDTKTN DPIGGSKMLV GNIELTFPLP GTGYDRTLRV FTFLDGGNVW GNAPGGTSTG
ANGLRYGYGV GLAWISPIGP LKLSLGFPLQ KHEGDQYQKF QFQIGTAF
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