Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2021 |
Symbol | |
ID | 4309063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2214147 |
End bp | 2215403 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638149838 |
Product | phage integrase family protein |
Protein accession | YP_773911 |
Protein GI | 115352072 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.713949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTACCG ACACCGCACT GCGCAACCTC AAGCCTAAGT CCCTGACTTA CAAGGCTTCC GACCGTGACG GCATGTACGT GACGGTATCG CCCACCGGTA CCGTCACCTT CCGCTACGAT TACCGTCTCA ACGGCCGGCG TGAAACGCTA ACCATCGGCC GTTACGGGCC GGCCGGCATC TCACTGGCCT TGGCTCGCGA AAAGCTGCTC GACGCCAAGA AAGCTGTTGC CGAGGGCAGA TCCCCGGCGC ACGAGAAGCA GCGCGAGAAG CGCCGGCTGA CCGCTGCCAA GAATTTCGGC GACATGACTG CCCGATGGCT TGCCGACGCC AAGATGGCCG ACAGCACGCG TGCGATGCGC AAGAGCATCG TTGATCGGGA CATCCTGCCG GCGTTCAAGA ACCGGCTGCT AAACGAAGTC AGCTCCGACG ACCTGCGCGC CTTGTGCAAC AAGGTGAAGG CTCGCGGCGC CCCCGCCACA GCCGTCCACG TGCGCGATAT CGTGAAGCAG GTCTACGCCT TCGCCATCCT GCACGGCGAG AAGGTCGACA ACCCGGCCGA TGGCGTGGGC GCGGCTTCGA TCGCGACCTT CGTGCCCAAG GATCGAGCGC TGTCACCGAT GGAAATCCGT TTGATGTACC GGCAGATGGA ATCGGTGGCC ACCTATCCGA CCATTCGCCT GGCGTTGCGC ATGATTCTGT TGACGCTGGT ACGCAAGAGC GAATTGATCG AGGCGACATG GGCCGAGGTT GATTTCGAGA ACGCGACCTG GACGATTCCA AAATCACGAA TGAAGGGTCG CAACCCGCAC GTCGTCTATC TGTCCCGCCA GGCCGTGGAC ATCTTCGTTG CGCTGCACAC TTGCGCAGCG GGGTCGAAGT TCGTCCTGCC GTCGCGCTAC GACGCCGACC GCTGTATGTC CAAGGCGACG CTCAACCGCG TGACCCAGAT CGTGTCCGAG CGCGCCAAAG CTGCCGGTTT GCCGCTAGAA CCTTTCACGG TGCACGACCT GCGCCGCACC GGCTCGACGC TGCTCAACGA GGTCGGCTTC AACGGCGACT GGATCGAGAA GTGCCTGGCG CATGAAGACG GCCGTTCCTC GCGCTCGGTC TACAACAAGG CCGAATACGC CGAGCCGCGC CGTCACATGC TGCAGGAGTG GGCCAACATG GTCGATGCCT GGGTGGAGGG TGGCGCATAC GCGCCCACGT TGTTGCCGAG CAATACGGTC GTGCCGGTGC TGAGCGCATC GGTCTGA
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Protein sequence | MLTDTALRNL KPKSLTYKAS DRDGMYVTVS PTGTVTFRYD YRLNGRRETL TIGRYGPAGI SLALAREKLL DAKKAVAEGR SPAHEKQREK RRLTAAKNFG DMTARWLADA KMADSTRAMR KSIVDRDILP AFKNRLLNEV SSDDLRALCN KVKARGAPAT AVHVRDIVKQ VYAFAILHGE KVDNPADGVG AASIATFVPK DRALSPMEIR LMYRQMESVA TYPTIRLALR MILLTLVRKS ELIEATWAEV DFENATWTIP KSRMKGRNPH VVYLSRQAVD IFVALHTCAA GSKFVLPSRY DADRCMSKAT LNRVTQIVSE RAKAAGLPLE PFTVHDLRRT GSTLLNEVGF NGDWIEKCLA HEDGRSSRSV YNKAEYAEPR RHMLQEWANM VDAWVEGGAY APTLLPSNTV VPVLSASV
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