Gene Bamb_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2021 
Symbol 
ID4309063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2214147 
End bp2215403 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content63% 
IMG OID638149838 
Productphage integrase family protein 
Protein accessionYP_773911 
Protein GI115352072 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.713949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTACCG ACACCGCACT GCGCAACCTC AAGCCTAAGT CCCTGACTTA CAAGGCTTCC 
GACCGTGACG GCATGTACGT GACGGTATCG CCCACCGGTA CCGTCACCTT CCGCTACGAT
TACCGTCTCA ACGGCCGGCG TGAAACGCTA ACCATCGGCC GTTACGGGCC GGCCGGCATC
TCACTGGCCT TGGCTCGCGA AAAGCTGCTC GACGCCAAGA AAGCTGTTGC CGAGGGCAGA
TCCCCGGCGC ACGAGAAGCA GCGCGAGAAG CGCCGGCTGA CCGCTGCCAA GAATTTCGGC
GACATGACTG CCCGATGGCT TGCCGACGCC AAGATGGCCG ACAGCACGCG TGCGATGCGC
AAGAGCATCG TTGATCGGGA CATCCTGCCG GCGTTCAAGA ACCGGCTGCT AAACGAAGTC
AGCTCCGACG ACCTGCGCGC CTTGTGCAAC AAGGTGAAGG CTCGCGGCGC CCCCGCCACA
GCCGTCCACG TGCGCGATAT CGTGAAGCAG GTCTACGCCT TCGCCATCCT GCACGGCGAG
AAGGTCGACA ACCCGGCCGA TGGCGTGGGC GCGGCTTCGA TCGCGACCTT CGTGCCCAAG
GATCGAGCGC TGTCACCGAT GGAAATCCGT TTGATGTACC GGCAGATGGA ATCGGTGGCC
ACCTATCCGA CCATTCGCCT GGCGTTGCGC ATGATTCTGT TGACGCTGGT ACGCAAGAGC
GAATTGATCG AGGCGACATG GGCCGAGGTT GATTTCGAGA ACGCGACCTG GACGATTCCA
AAATCACGAA TGAAGGGTCG CAACCCGCAC GTCGTCTATC TGTCCCGCCA GGCCGTGGAC
ATCTTCGTTG CGCTGCACAC TTGCGCAGCG GGGTCGAAGT TCGTCCTGCC GTCGCGCTAC
GACGCCGACC GCTGTATGTC CAAGGCGACG CTCAACCGCG TGACCCAGAT CGTGTCCGAG
CGCGCCAAAG CTGCCGGTTT GCCGCTAGAA CCTTTCACGG TGCACGACCT GCGCCGCACC
GGCTCGACGC TGCTCAACGA GGTCGGCTTC AACGGCGACT GGATCGAGAA GTGCCTGGCG
CATGAAGACG GCCGTTCCTC GCGCTCGGTC TACAACAAGG CCGAATACGC CGAGCCGCGC
CGTCACATGC TGCAGGAGTG GGCCAACATG GTCGATGCCT GGGTGGAGGG TGGCGCATAC
GCGCCCACGT TGTTGCCGAG CAATACGGTC GTGCCGGTGC TGAGCGCATC GGTCTGA
 
Protein sequence
MLTDTALRNL KPKSLTYKAS DRDGMYVTVS PTGTVTFRYD YRLNGRRETL TIGRYGPAGI 
SLALAREKLL DAKKAVAEGR SPAHEKQREK RRLTAAKNFG DMTARWLADA KMADSTRAMR
KSIVDRDILP AFKNRLLNEV SSDDLRALCN KVKARGAPAT AVHVRDIVKQ VYAFAILHGE
KVDNPADGVG AASIATFVPK DRALSPMEIR LMYRQMESVA TYPTIRLALR MILLTLVRKS
ELIEATWAEV DFENATWTIP KSRMKGRNPH VVYLSRQAVD IFVALHTCAA GSKFVLPSRY
DADRCMSKAT LNRVTQIVSE RAKAAGLPLE PFTVHDLRRT GSTLLNEVGF NGDWIEKCLA
HEDGRSSRSV YNKAEYAEPR RHMLQEWANM VDAWVEGGAY APTLLPSNTV VPVLSASV