Gene Bamb_1971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1971 
Symbol 
ID4311737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2167903 
End bp2169075 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content61% 
IMG OID638149788 
ProductATPase central domain-containing protein 
Protein accessionYP_773861 
Protein GI115352022 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.68669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATGT TGGACGAAAT GAACGAATCA CAGTCTGATT TAGCCCAGGT GGTCCGGCTG 
GCTCTCGCTG AGCAGACCGA GGACGTGCGC CTGTTCGTGG CCAGGCTCGT CCGGAAGTAC
CGCAACACCG ACCCCGAGCT GGCGGAGCAG ATGGACCTTT ACCTGCGCGC GAAGATGCCT
CGAACGAGCG CGCCCATGCG CAAGGCCACG CCGCCTGCGA CGCCCGCGCA TGCTTTGCCG
GTGGACGACG AATCGCGGCT GTCCTTGCTG AAAGTTTTCA AGGACACGCC CGATAGAGAG
CAGCCCTTGC TGTCGGTCGA CCTTGAGGAG ACGTTGAGCC AATTGATTCA GGAGCGACGC
CAGACGGAAC GCCTGGCATC GATGGGATTG AGCCCGACGC GCTCCGCCAT CTTTGTGGGG
CCACCCGGCG TCGGCAAAAC GTTGACTGCG CGCTGGCTCG CCTCGCAACT GGGTGTGCCG
CTGTACGTGT TGGATCTGAC CGCTGTCATG AGCAGTCTGC TCGGCCGGAG CGGGACCAAT
CTCCGCGCCG CACTCGACTT CGCGAAACGC AGTCCGTGCG TGTTGCTGCT GGATGAGATC
GATGCCATCG CCAAGCGCCG CAGCGACGAT ACCGATGTCG GCGAGCTGAA GCGCCTGGTC
ACCGTCATCC TGCAGGAGGT CGATGAATGG CCAGCTACCG GACTGTTGCT TGCCGCCACC
AACCACTCTG AACTTATCGA CCCTGCGTTG TGGCGCCGCT TCGATCTGGT GATTACGTTC
AAAGCGCCAG AAATGTCGGC TGTCAAAGCG GCGATCAAAC GTTTCCTCGG TCCAGACTAC
GCGTTGTTCG GTCGCTGGAT CGACATCCTG ACATTCGCAT TTAACGGCGA GTCGTTCAGC
GACATCGAAC GGGACCTTCA GCGTTTCCGC CGTGCGGTAG CGCTGGGCAC CGCATCGGAT
GCCGATCTCA TTGAAGAGTT CATCAAATCG CGTGCGCTCG TCCTGGATCG GCAGGCTCGC
ATCGATCTGG CCGTGCTGCT GGCAAAGCAG ACCCGTCTGT CCCAGCACAC CGTCTCCGAT
ATCACTGGGG TGAGTCGCGA CACCATCCGG AAGTACACGA ACGAGCCATC GCCTGCAGCG
AAAAAGATCT CGAAGGGAAA ACCTGACGCA TGA
 
Protein sequence
MRMLDEMNES QSDLAQVVRL ALAEQTEDVR LFVARLVRKY RNTDPELAEQ MDLYLRAKMP 
RTSAPMRKAT PPATPAHALP VDDESRLSLL KVFKDTPDRE QPLLSVDLEE TLSQLIQERR
QTERLASMGL SPTRSAIFVG PPGVGKTLTA RWLASQLGVP LYVLDLTAVM SSLLGRSGTN
LRAALDFAKR SPCVLLLDEI DAIAKRRSDD TDVGELKRLV TVILQEVDEW PATGLLLAAT
NHSELIDPAL WRRFDLVITF KAPEMSAVKA AIKRFLGPDY ALFGRWIDIL TFAFNGESFS
DIERDLQRFR RAVALGTASD ADLIEEFIKS RALVLDRQAR IDLAVLLAKQ TRLSQHTVSD
ITGVSRDTIR KYTNEPSPAA KKISKGKPDA