| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1959 |
|---|
| Symbol | |
|---|
| ID | 4310197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 2156188 |
|---|
| End bp | 2156958 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638149776 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_773849 |
|---|
| Protein GI | 115352010 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.622516 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAAC CCAACGTCGT GCCGCTGTCG GCGGCCCCGC TCTACGTGCA GATCAAGGAC
ACGCTGCGCG CACGGATCCT CGACGGCACC TATGCGCCGC ACAGCCGGAT GCCGTCCGAG
CACGAACTGT GCGCGATGTT CGACGTGAGC CGCATCACCG TGCGCCAGGC GCTCGGCGAC
CTGCAGAAGG AAGGCCTGCT GTTCAAGTTG CACGGCAAGG GCACCTTCGT GTCGAAGCCG
AAGGCGTTCC AGAATGTGAC GTCGCTGCAG GGCTTCGCCG AGGCGATGTC GTCGATGGGC
TACGAGATCG TCAACCAGCT GCGCAGCGTT CGCACCGTGA AGGCCGACCG CCATCTCGCG
ACGAAGCTGA ACGTGCCGGA AGGCGCGCCG CTCGTCGAGA TCCACCGCGT GCGGCTGCTC
AACCGCGAGC CCGTGTCGCT CGAGCAGACG TGGGTGCCCG AGGCGCTCGG CAAGCGGCTC
GCGGGCGCGG ATCTCGCGAC CCGCGACATC TTCCTGATCC TCGAGAACGA CTGCGGCGTG
CCGCTCGGCC ACGCCGACGT GTCGATCGAC GCGATCCTCG CCGACGATGA AATCGTCGAT
GCGCTGCGCG TCGAGGAAAG CAGCCCCGTG CTGCGTATCG AGCGCCTGAC GCACGACGCG
TCGGGCACAC CGATCGACTA CGAACACCTG TACTTCCGCG GCGACGCCTT CCAGTACCGG
TTGCGCATCG ATCGGCAGAA GGCGCTCCAA CCTGCAAGGA ACCCGCAATG A
|
|---|
| Protein sequence | MTQPNVVPLS AAPLYVQIKD TLRARILDGT YAPHSRMPSE HELCAMFDVS RITVRQALGD
LQKEGLLFKL HGKGTFVSKP KAFQNVTSLQ GFAEAMSSMG YEIVNQLRSV RTVKADRHLA
TKLNVPEGAP LVEIHRVRLL NREPVSLEQT WVPEALGKRL AGADLATRDI FLILENDCGV
PLGHADVSID AILADDEIVD ALRVEESSPV LRIERLTHDA SGTPIDYEHL YFRGDAFQYR
LRIDRQKALQ PARNPQ
|
|---|
| |