| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1931 |
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| Symbol | ispD |
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| ID | 4310935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2125562 |
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| End bp | 2126272 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638149748 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_773821 |
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| Protein GI | 115351982 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTCCCC GACTTTTCGC CCTGATTCCT TGCGCCGGCA CGGGCAGCCG CTCCGGTTCG
GCCGTGCCGA AGCAATACCG CACGCTGGCC GGCCGCGCGC TCCTGCATTA CACGCTCGCC
GCGTTCGACG CGTGCAGCGA ATTCGCGCAG ACGCTCGTCG TCCTCGCGCC CGACGACACG
CACTTCGACG CGCGCCGCTT CGCGGGCCTG CGCTTCGCGG TGCGCCGCTG CGGCGGCGGC
TCGCGGCAGG CGTCGGTGCT GAACGGGCTG CTGGGGCTGG GCGAATTCGG CGCGACCGAC
CAGGACTGGG TGCTCGTGCA CGACGCCGCG CGCCCCGGCA TCACGCCGGA GCTGATCCGC
ACGCTGGTCG CGGCGCTGAA GGACGATCCG GTCGGCGGCA TCGTCGCGCT GCCCGTGGCC
GATACGCTCA AGCGCGTGCC GGCCGGCGGC GACGCGATCG CCCGCACCGA GTCGCGCGAC
GCGCTGTGGC AGGCGCAGAC GCCGCAGATG TTCCGCATCG GCATGCTGCG CGACGCGATC
CTGCGCGCGC AGCGGGAAGG GCACGACCTG ACCGACGAGG CCAGCGCGAT CGAATGGGCC
GGCCATACCC CGCGCGTCGT GCAGGGCAGC CTGCGCAACT TCAAGGTCAC ATACCCCGAA
GATTTCGCGC TCGCCGAAGC GATCCTCGCG CGCGGCACGA ACGCTTCCTG A
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| Protein sequence | MTPRLFALIP CAGTGSRSGS AVPKQYRTLA GRALLHYTLA AFDACSEFAQ TLVVLAPDDT
HFDARRFAGL RFAVRRCGGG SRQASVLNGL LGLGEFGATD QDWVLVHDAA RPGITPELIR
TLVAALKDDP VGGIVALPVA DTLKRVPAGG DAIARTESRD ALWQAQTPQM FRIGMLRDAI
LRAQREGHDL TDEASAIEWA GHTPRVVQGS LRNFKVTYPE DFALAEAILA RGTNAS
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