Gene Bamb_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1885 
Symbol 
ID4311598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2065165 
End bp2066763 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content63% 
IMG OID638149699 
Producthypothetical protein 
Protein accessionYP_773775 
Protein GI115351936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.51377e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGACC GCACGCAACA GCTCGACCTG ACCGCTCCGA TCCCAACCGG AAACATCAAG 
GCCGCAGCCG CGGCGGCCGG CGCAACGTCG GCGGACCTGT GGATGGTCCC CTACGAACAG
CTGCACTACG ATCCGGCTGA CAACATCCGG GCGGTTGATA CCGAATGGGT TGCACACCTG
GCCGCGCTGA TGCGCGAGAA CGGGTACGAC AAGGGCTCGC CCCTCCATTG CTACGCCCGG
AAGGTTGACG GTAAAGATCT GCTCTACGTT TACAAGGGGC AGCACCGCTA TCTCGCGGCG
GGACACGTGA TCGCAACCGG GAAGGATCTG GGGAAGATCC CGGTCGTCGT CCGCGACGCC
AAAAACGTGA ACCGCGCCGA AATGGTGATC GACGGCTATC TCAGCAACGA CAGCAAACGG
TCGTCGCCGC TCGATTTGGC AGGCGTTGTC GCCGAGCTGC GCGACATTCA CGGCATGACC
CTCGCGGCCA TCTGCAAGCG CCTGAATGTC ACTGATCAAA CAATCCGCGA CGTCGGCCTG
CTCGAACGGG CACCGGCTGA ACTGCATCAG CTCGTACGCG ACGGGCAATG CACCGGCACA
CTGGCGATCG AAGAGATCCG CCGGCATGGG GGTGAAAAGG CGCTCGAACG CATCGTTGTC
GGGATCTCCA AAGCAGCGGA AGCCGGCAAG TCGAAGGTGA CGAAGAAGTA TCTCGAAGCC
GTGCCCCTAC TCGATCCGCT TCAGGACACG GCATCACTGG CAGAGCAGAC AACATCCGCA
AGCGCCACCG CTAGCCCCGA ACCTGTCGCC ACGTCGACGG CTGCAGACGT TACTGTCGAG
ACGCACGCGG CGGCACAAGC AGCCCCGCGC CACACGTCTC CCGCCAAGTT CAGCGAGAAG
CAGTCAAAGC AACTTTTGCT GGCGCTGCAG GCTGTCTTGC GCGATGAAGG GTTCGGTAAG
CTCGCGCCGG ACACAATCCA CGCTGTTCAC ACGGCGCTGT TGCCGATCAG CGATCTGCTT
GATGCGAAGC CCGCCGGGAA AGTGTGGCCG GTCACGGAAC CGGACGAGAG CGGCGGCTGC
CAAGCCGTCG AGACCTTGCG CGGTCCCGAG CGAACCGGTC GGATCAAGGG GCCGCTCGCG
CACATTCGCA TCGCACAACC GAGACCGGGG GCATGGATTT ACGCGATCGA GTACAACACC
GGCACCAGCT TTGCGAGCGA CCCTTTGAAG GTATCTCCGC AGACGCGCGC AGTGTGGACG
CGCGTTCAGG CGATTCGTTC GGGCGCCGCG CGGCTCATCG AGACCATCAA GTCACCGATC
CACGGGCAGA CGAAGGTAGA GCAGGCGGCG TTTAAGAAGA TTCTCGCGTG GGCGCACGAG
ATCATCGCTA TGCCTGATCC CGATATGACT GTCGAATTCT CGGCAGCCAC CGCCAAAGGC
GAGCGCCCCG ACCTGACGGA CGTGTTAACG GCCATCGAGC ACAAGCGGCG GATCAAGTCG
AACACGGCGC TGCTGGCCGC TGCATTTCCG GCGCAGAAGG TAACGCCCGG TCTCGACCCT
GCGTCGGCAT GGGCGCTCCC GACTGGAGGT GCGAAATGA
 
Protein sequence
MDDRTQQLDL TAPIPTGNIK AAAAAAGATS ADLWMVPYEQ LHYDPADNIR AVDTEWVAHL 
AALMRENGYD KGSPLHCYAR KVDGKDLLYV YKGQHRYLAA GHVIATGKDL GKIPVVVRDA
KNVNRAEMVI DGYLSNDSKR SSPLDLAGVV AELRDIHGMT LAAICKRLNV TDQTIRDVGL
LERAPAELHQ LVRDGQCTGT LAIEEIRRHG GEKALERIVV GISKAAEAGK SKVTKKYLEA
VPLLDPLQDT ASLAEQTTSA SATASPEPVA TSTAADVTVE THAAAQAAPR HTSPAKFSEK
QSKQLLLALQ AVLRDEGFGK LAPDTIHAVH TALLPISDLL DAKPAGKVWP VTEPDESGGC
QAVETLRGPE RTGRIKGPLA HIRIAQPRPG AWIYAIEYNT GTSFASDPLK VSPQTRAVWT
RVQAIRSGAA RLIETIKSPI HGQTKVEQAA FKKILAWAHE IIAMPDPDMT VEFSAATAKG
ERPDLTDVLT AIEHKRRIKS NTALLAAAFP AQKVTPGLDP ASAWALPTGG AK