| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1880 |
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| Symbol | |
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| ID | 4311593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2059577 |
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| End bp | 2062084 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638149694 |
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| Product | virulence-associated E family protein |
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| Protein accession | YP_773770 |
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| Protein GI | 115351931 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5545] Predicted P-loop ATPase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00331522 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACAC TGGACCAGAT CATTCAGCAA TTGCGTGCGG CGGGGCATCC TGACCTACCC
GCCGGCCATC CGGTCGCGGA CGGGAAACAT CATCGGTACG GGCCGCGCAA GAAATACTGG
TATCAGCTTC GCGAGGTCGT CAGCAAGGGC TCAGTGATCG GCTATGGCGG TACGTTCGGC
CACTTCTCGG GCGACGATCC GGGCACCGAG CGATTCGAGT GGGGCGGCGC ACCGTTGAGC
GAAGAAGCGC TCGCGGAAAC GCGTCGCCGG CAAGAGGCTG CCGACCGCGA ACAGGTCGAG
CGCGACGCAC GGCAGGCGAA GCTCGCCGCG AACCGTGCAC GCGACCAGTG GAACCGTGCT
GCAGAGCATG GCGAGTCCGC CTATCTCGAC CGCAAACACA TCACGGCAGA AGGCGTACGT
TTCGACGCGG ACGGCACGAT CTTCGTGCCG ATGTATCAGT ACGGCGACGG CGCCCGTCTC
GTCGGCCTGC AAAAGATCAC GCCGGACGGC GCGAAGCGCT TCAACAAGGG CATGGAGAAG
AAGGGCGCTT CGTATCTGCT CGGTGAGGTC GGTCCAGATG ACCAGGTCGT GCTGGTCGCC
GAAGGCTATG CAACCGCGCG TGCGATCCGC ATGGCGATCG ACGACGCGTT CGCGGTCAAT
ATCTGTTTTG ACGCGGGTGG CATCCTTCCG GCCGTGCGCT ACCTGCGTAT GACGTATCCG
GATGTGCATG TGCTGGTCTG CGCCGACGAC GACTGGAAGA TCGAGCAGCG CATGCGCGAC
TGGCTCGCCG ATGAGTTTGC TTTCCGGGGC GAACTGGTGT TTGGTGCAGA CCCGGTGCGG
ATAGAAGCGA AGAACACGTG GTACATGGTT GCCGTGTCAC GCCGTCGTGA CGACAACGGC
GTGCCGTATG TCGAGGTCAG CTATGGCAAC GACGTTATGC CGCTGCGTCG CAAGCGCTTC
GAGAACACGG GCCTGAAGCG CGCGTATGAG GCGGCAGCGA CAGTCGACGA CGTCAGCGTT
ATCTATCCGG TATTCGCTAA TCGCGGCGAG CGCAAGCTGA CCGATTTCAA CGACCTGCAC
GTCGAAGAGG GCTTCGAGGC TGTCGAGGCA CAGCTGCAGG CGGCAATCTT GCGCGTCATC
GCCCCAGCGA ACGAAGAGAT CCGGCCGGCA ACGGTTGCAG TGTCGACCGC GGACGAGACG
CCGACGAAGC CCGCCGCGAC GTCCGCTGCC GCGAAACAGC CGGAATGGGA TGGCCGTGAG
GCAGAGAACG GCGCGCACAC GTGGGAGCAG GATCTGGCGC GTTCGGACAA GGGCACGCTG
CTGCCGACGC TCGGCAACGT GCACATGATC CTGTCGAACC ACAAGGCATG GCAGGGCGTC
ATCGAGCAGG ACGACTTCGG TGGACGCGTG ATGAAGCGCA AGGCGCCGCC GTTCCCGCAA
GGCGTGACAG GTGAATGGAC CGACATGGAC GATCAGCGCT GCGCGCTCTG GTTGTCGCAG
CGGTACGGCC TCTCGGTGCG TACCGATATC GTGATGAACG CGGTCCTGTT GGTGGCGGAC
GCTACACACT TCCATGACGT GCGCGAATAC CTTGAAGGGC TGAAATGGGA CGGCGTACCG
CGTGTCCGTT CGATGCCGTC GACATACCTG CGCGTGGCTG ACAGCGAGTA TGTACAGCTC
GCGTTCATGA AATGGATGAT CGCGGCCGTC GCTCGCGTGA TGGAGCCGGG CTGCAAGGTG
GACAACGTCT TGATCCTCGA AGGCAAGCAG GGGCATCGCA AATCGACAGC GCTGAAGGTG
CTGGCCGGCG CTCCGTGGTT CACCGATACG CCGATCCAGA TTGGCAACAA AGACACGTAC
GCGGTGCTGG CCGGTAAGTG GGTGATCGAA CTCGCCGAAC TGGACTCGTT GAACAAGGCC
GACTCGTCGG CAGTGAAAAG CTTCTTCGCG ACGGCCGTCG ACCGGTTCCG CAACTTCTAC
GGTAAGCGTG CGACCGACGT CCCGCGTCAG TGCGTCTTCG CTGGCTCGGT CAACTTCGAT
ACGTACCTGA AGGACGAGTC GGGCAACCGA CGCTACTGGC CGCTGCGTGT CGGTGGTCTG
GTCGATATCG ACGGCATCGT GGCCGTGCGT GATCAGCTTT GGGCCGAAGC CGTGCACCTG
TACCGCACGG GCGTCGTGTG GCACGTGGAA GAGCATGAAC GCCCGCTGTT CGAGATCGAG
CAGGCGGAGC GCTACGAAGG CGACGTGTAC GAGGACAAGA TCGCAAAGGC CCTGGAATTC
GTGTCGCGCA CGACGATGGA AGAGATCCTC GCGGACATCC TGAAGCTCGA TACGTCGAAG
TGGACGCTGG CGGAGCAGCG CCGCATCGGC AAGGCGTTGA AGTCGCTCGG GTGGGTACGC
AAGCGCGAGT CGACAGGGTC GCGCGGTTGG TATTACGTGA GCGAGCAGCA AGAGCCGGAA
GTGGAACGTG AACTGGTCGC AGCGGGTGAT GACGACAGTC CGCTGTGA
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| Protein sequence | MATLDQIIQQ LRAAGHPDLP AGHPVADGKH HRYGPRKKYW YQLREVVSKG SVIGYGGTFG
HFSGDDPGTE RFEWGGAPLS EEALAETRRR QEAADREQVE RDARQAKLAA NRARDQWNRA
AEHGESAYLD RKHITAEGVR FDADGTIFVP MYQYGDGARL VGLQKITPDG AKRFNKGMEK
KGASYLLGEV GPDDQVVLVA EGYATARAIR MAIDDAFAVN ICFDAGGILP AVRYLRMTYP
DVHVLVCADD DWKIEQRMRD WLADEFAFRG ELVFGADPVR IEAKNTWYMV AVSRRRDDNG
VPYVEVSYGN DVMPLRRKRF ENTGLKRAYE AAATVDDVSV IYPVFANRGE RKLTDFNDLH
VEEGFEAVEA QLQAAILRVI APANEEIRPA TVAVSTADET PTKPAATSAA AKQPEWDGRE
AENGAHTWEQ DLARSDKGTL LPTLGNVHMI LSNHKAWQGV IEQDDFGGRV MKRKAPPFPQ
GVTGEWTDMD DQRCALWLSQ RYGLSVRTDI VMNAVLLVAD ATHFHDVREY LEGLKWDGVP
RVRSMPSTYL RVADSEYVQL AFMKWMIAAV ARVMEPGCKV DNVLILEGKQ GHRKSTALKV
LAGAPWFTDT PIQIGNKDTY AVLAGKWVIE LAELDSLNKA DSSAVKSFFA TAVDRFRNFY
GKRATDVPRQ CVFAGSVNFD TYLKDESGNR RYWPLRVGGL VDIDGIVAVR DQLWAEAVHL
YRTGVVWHVE EHERPLFEIE QAERYEGDVY EDKIAKALEF VSRTTMEEIL ADILKLDTSK
WTLAEQRRIG KALKSLGWVR KRESTGSRGW YYVSEQQEPE VERELVAAGD DDSPL
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