Gene Bamb_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1874 
Symbol 
ID4311587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2052171 
End bp2053256 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content67% 
IMG OID638149688 
Productpeptidase S14, ClpP 
Protein accessionYP_773764 
Protein GI115351925 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCA ATCATAAGTG GTGGGATATC CGGGCGCAGG CGAACGCGGC CGGCGAGGTC 
GAGATCCGGA TCTATAACGA GATCGGCTTT TGGGGCACGG ACGCGCAGAC CTTCGTGACC
CAGCTCGATG CGGCAGCGGC CAACGCTTCC ACGATCGTGG TGGCGATCAA CTCGATGGGT
GGCGACGTGT TCGATGCGTT CGCGATCTAC AACGCACTGC GCCGGCACGC TGGCAAGGTG
AAGGTGCGCG TCGACGGCGT CGCGGCATCG GCCGCATCGC TGATTGCGAT GGCCGGCGAC
GAGATCGTGA TGCCGGAGAA CGCGCTGCTG ATGATCCACA ACGCGCACAC GGTGACGGCG
GGCGAGGCGA AAGACCTGCG ACGTATTGCC GACCTGCTCG ATAACGCAGG CGACGGGATT
CTCGCGGCGT ACGCGGCCAA GAGCGGTCAG TCGATCGACG AGATCCGGGG CATGATGGAC
GCCGAGACGT GGCTCACGGC CGCGCAGGCA AAGGAGAAGG GTTTCTGCGA CACGATCGAG
GCGGCAGTGA AGCTGTCGGC GTCGGCCAGC TCGACGGCGC TGCTCGCGCG CTTTTCGGCG
GTGCCCGATG TCGTGCGGGC GCTGGTCGAC GAGACGGAGC CGACCGACCC GCCGCAGCCT
GACACGCAAC CCAATACACC GCCCGAACCC AATCCCGATC CGCAGCCGGT GCCGCCAGCG
CCCGACGTGT CGGCGCTCGC ATCGCACGTG TTCGCGGCAT GCCGTGACGC GCGCCTGTCG
CATTGCGTCG AGGCGATCGT GACGGCGACC GGCCTGAAGG ATCGGGCAAC CGTTGACGCG
GCGCTTCAGC AGGCCGCGGA CATCGCCGGG ATCTGCCTTG CGGCGAATGT GCCGGAGCTG
ACCGCGCAGT TCGTCGCCGA CGGGCTGACC CCCGATCACG TACGCGCGCG ACTGTTCGAG
CGCGTGACGG CGTCGCAATC GCGCATCAAT CCCCGCGCTC AATCGACGGC GCAAAACGAG
CCGGCCGTGG TCGCGAACGC GCCGCGCGCG GCGTCCATCT ACGCGGCTCG CAAGAGCGGC
AAGTAA
 
Protein sequence
MKRNHKWWDI RAQANAAGEV EIRIYNEIGF WGTDAQTFVT QLDAAAANAS TIVVAINSMG 
GDVFDAFAIY NALRRHAGKV KVRVDGVAAS AASLIAMAGD EIVMPENALL MIHNAHTVTA
GEAKDLRRIA DLLDNAGDGI LAAYAAKSGQ SIDEIRGMMD AETWLTAAQA KEKGFCDTIE
AAVKLSASAS STALLARFSA VPDVVRALVD ETEPTDPPQP DTQPNTPPEP NPDPQPVPPA
PDVSALASHV FAACRDARLS HCVEAIVTAT GLKDRATVDA ALQQAADIAG ICLAANVPEL
TAQFVADGLT PDHVRARLFE RVTASQSRIN PRAQSTAQNE PAVVANAPRA ASIYAARKSG
K