| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1811 |
|---|
| Symbol | rpsF |
|---|
| ID | 4309858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 1999360 |
|---|
| End bp | 1999734 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 638149625 |
|---|
| Product | 30S ribosomal protein S6 |
|---|
| Protein accession | YP_773701 |
|---|
| Protein GI | 115351862 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0360] Ribosomal protein S6 |
|---|
| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.844657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCATT ACGAAATCGT ATTCATCGTG CACCCCGATC AAAGCGAGCA AGTGCCCGCG
ATGATCGAGC GTTACAAGAC CACGATCACG ACGCACGGCG GCCAGATCCA CCGTGTCGAA
GACTGGGGCC GTCGCCAACT GGCCTACATG ATCGAGAAAC TCGCGAAGGC TCACTACGTC
TGCATGAACA TCGAGTGCGA CCAGACGACG CTCGACGAAC TCGAACACGC GTTCAAGTTC
AACGACGCCG TGCTGCGCCA CCTCATCGTC AAGATGAAGA AGGCCGAGAC CGGCCCGTCG
CCGATGATGA AGGAAGTTCA GCGCGAAGAA GCCAAGAAGG CGGCTGCTGC TCAGCCGACC
GAAGCGCAGG CTTAA
|
|---|
| Protein sequence | MRHYEIVFIV HPDQSEQVPA MIERYKTTIT THGGQIHRVE DWGRRQLAYM IEKLAKAHYV
CMNIECDQTT LDELEHAFKF NDAVLRHLIV KMKKAETGPS PMMKEVQREE AKKAAAAQPT
EAQA
|
|---|
| |