Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1733 |
Symbol | |
ID | 4309815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1915045 |
End bp | 1917288 |
Gene Length | 2244 bp |
Protein Length | 747 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638149547 |
Product | helicase c2 |
Protein accession | YP_773623 |
Protein GI | 115351784 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.336556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATTCAC CGCTTGAAGC CAACCCCGAT GCCCGGCCTG ACGCGTCGTC TGCCGGGCGC GTTCGTGCGC CCGAAGGCAC GTTCGAGCTG AGCCGCAAGC GCGTCGACGA ACTCGACACG ATCTTCGGTG AAGGCGGACT GCTTGCGCGC GCGCTCGACG GCTATCATCC GCGTCAGTCG CAGATCGAGA TGGCGCGCGC GGTCGCGTCC GCGATGGAGG CGTCCGCGCG CCGGTTGCCC GAACCCGAAA TCTTCGAAAC CCGCAAGCGG CCCGCGCGCC GCCTCGGCGA AGGCGACAAG GCGGCCGAAT CCGTGGCGGA CGCTGCGGCG GCCGACACCG ACAGCGACGC CGGCGACAAC ACGCTGATCG TCGAGGCCGG CACCGGTACC GGCAAGACCT ATGCATACCT GGTGCCCGCG ATGCTGTGGG GCGGAAAGGT GATCGTGTCG ACCGGCACGA AGCACTTGCA GGACCAGCTG TTCCAGCGCG ACATCCCGAC CGTGCGCAAC GCGCTCGCGG TGCCGGTGAC GGTCGCGATG CTCAAGGGCC GCTCGAACTA CCTGTGCCAT TACTATCTGC AGCGCACGGC CGACAACGGC CGCCTGCCGT CGCGACAGGA CACCGCCTAC CTGCAGGAAA TCGTCCGGTT CGCGAAGATC ACGAAAAGCG GCGACAAGGC CGAGCTCGCG AGCGTGCCGG AGACGGCGCC GGTGTGGTCG ATGGTCACGT CGACGCGCGA CAACTGCCTC GGCCAGGAGT GCCCGCATTA CAAGGAGTGC TTCGTGATGC AGGCGCGGCG CGAGGCGCAG CAGGCCGACG TCGTCGTCGT CAACCATCAC CTGTTCTTCG CGGACATCAT GCTGCGCGAC ACCGGGATGG CCGAGCTGCT GCCGAACGCG AACACGGTGA TCTTCGACGA AGCGCACCAG CTGCCGGAGA CGGCGACGCT GTTCTTCGGC GAGACGCTGT CGACCACGCA GATCCTCGAA CTCGCACGCG ACACGGTCGC CGAAGGCCTG AGCCATGCGC GCGATGCGGT CGAGTGGGTG AAGCTCGGCG GCGATCTCGA ACGCGCGGCG CGCGATCTGC GCCTCGCGTT CGCGAACGAC CAGATCGTGC GCATGTCGCT CGCGCAACTG GGCGACGATC ACCCGATGTT CGGCGCGCTC GACGCGCTCG AAGCGGCGCT CGATGCGCTC GCATCGGCGC TCGCGAGCCA GGCCGAGCGG GCGGAATCGC TCGGTGCGTG CCTGCGGCGC GCGCGCGAGC TGCAGGACCT GCTCGCGGGC TGGGTCGCGC CCGGCGCGGC GCAAGCGGCC GCGCAGGCCG ATGCCGCGGC AGCCGGCGAC AAGGCGGCTG CCGACGACCC GAACGAGAAG GTGCGCTGGG TCGAAGTATT CGCGCATACC GTCCAGCTGC ACGAGACGCC GTTGTCGGTC GCGCCGATCT TCGCGAAGCA GCGCGCCGGC GTGCCGCGCG CGTGGGTCTT CACGTCGGCG ACGCTGTCGG TGCGCGGCGA CTTCACGCAC TACGCGGCCC AGATGGGCCT CAGCTCGCGG CGCTCGATGA CGCTCGCGAG CCCGTTCGAC TATCAGACGC AGGGCCTGCT GTACGTGCCG CGCAACCTGC CGCAGCCGTC GTCGCCGGCG TTTACCGACG CCGTATTCGA TGCGGCGCTG CCGGCGATCG AGGCGTCGGG CGGCGGCGTC TTCATGCTAT GCACGACGCT GCGCGCGGTC GACCGGATCG CGTCAAAGCT GCGCGACGTG ATCGAGTCGC GCGGCTGGAA CACGCCGCTG CTGGTGCAGG GCGATGCCAG CCGCACCGAG CTGCTCGACC GCTTCCGTTC GTACGGCAAT GCGATCCTCG TCGGCAGCCA GAGCTTCTGG GAAGGTGTCG ACGTGCGCGG CGACGCGCTG TCGCTCGTCG TGATCGACAA GCTGCCGTTC GCGCCGCCCG ACGATCCGGT GCTCGCCGCG CGACTCGATG CGCTAACGAA GAAGGGCTTG AGCCCGTTCG CGGTTCACCA GTTGCCGCAG GCCGTGATCA CGCTGAAGCA GGGCGCGGGC CGCCTGATTC GCGCGGAGAC AGATCGCGGC GTGCTGATGA TCTGCGACAC GCGGCTGGTC GACAAGCCGT ACGGCCGCCG GATCTGGCAG AGCCTGCCGC CGTTCAAGCG CACGCGCGAG ATCGCGGTCG TGCAGGACTT CTTCGACGAA CATCGCGCGC AAAAGCGCGC GTGA
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Protein sequence | MNSPLEANPD ARPDASSAGR VRAPEGTFEL SRKRVDELDT IFGEGGLLAR ALDGYHPRQS QIEMARAVAS AMEASARRLP EPEIFETRKR PARRLGEGDK AAESVADAAA ADTDSDAGDN TLIVEAGTGT GKTYAYLVPA MLWGGKVIVS TGTKHLQDQL FQRDIPTVRN ALAVPVTVAM LKGRSNYLCH YYLQRTADNG RLPSRQDTAY LQEIVRFAKI TKSGDKAELA SVPETAPVWS MVTSTRDNCL GQECPHYKEC FVMQARREAQ QADVVVVNHH LFFADIMLRD TGMAELLPNA NTVIFDEAHQ LPETATLFFG ETLSTTQILE LARDTVAEGL SHARDAVEWV KLGGDLERAA RDLRLAFAND QIVRMSLAQL GDDHPMFGAL DALEAALDAL ASALASQAER AESLGACLRR ARELQDLLAG WVAPGAAQAA AQADAAAAGD KAAADDPNEK VRWVEVFAHT VQLHETPLSV APIFAKQRAG VPRAWVFTSA TLSVRGDFTH YAAQMGLSSR RSMTLASPFD YQTQGLLYVP RNLPQPSSPA FTDAVFDAAL PAIEASGGGV FMLCTTLRAV DRIASKLRDV IESRGWNTPL LVQGDASRTE LLDRFRSYGN AILVGSQSFW EGVDVRGDAL SLVVIDKLPF APPDDPVLAA RLDALTKKGL SPFAVHQLPQ AVITLKQGAG RLIRAETDRG VLMICDTRLV DKPYGRRIWQ SLPPFKRTRE IAVVQDFFDE HRAQKRA
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