Gene Bamb_1699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1699 
Symbol 
ID4310306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp1881026 
End bp1881691 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content67% 
IMG OID638149514 
Productcephalosporin hydroxylase 
Protein accessionYP_773590 
Protein GI115351751 
COG category[V] Defense mechanisms 
COG ID[COG3510] Cephalosporin hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0146092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGACA TCAACATCGA ATGGCTGACG CGCGCCGCCG AATTCGACCA TCTGTTCCAG 
ACGCGCTGGC TCGGCGAGCG CTTCTTCCAT CTGCCCGGCG ACATGCTCGC CCTGCAGGAA 
CTGATCTGGC GCGCGCGTCC CGACTGCATC GTGCAGACCG GCATCGCGGC GGGCGGCGGC 
GTCGTATTCT CCGCGTCGAT GCTGGAATTG ACGGGTGGCC ACGGCCGTGT GGTCGCGATC 
GAACCGCGCC TGCGCGACGA GGTCAGGCAG CGCCTGCAAT CGCACCGGCT CGCCCATCGC 
ATGGTGCTGA TCGAAGGCGA ATCGTGCGCA ACCGACACGC TCGCATCGGT ACGCGCGCGG 
ATCGGCGACG GCGCGCGCGT GATGGCGATC CTCGATCTCA CGCATACGCA CGCGCACGTG 
CTGCGCGAAC TCGCCTGCTA TGCGCCGCTC GTGACGCCCG GCAGCTACGC GATCGTGATG 
GATACCATCA TGGAGTATCT GCCCGAGTCG ATGTTCGACG GCAAGCCGTA CGGCAGAGGC 
AACAACCCGG CCACGGCCGT GCATGCGTTT CTCGCCGGCG ACGACCGGTT CGAAGTCGAC 
CACGACATCG AGGACCGCGT GCTCATGACG CTGTCGCCAG GCGGCTTCCT GAAGCGAGTG 
CGCTGA
 
Protein sequence
MRDINIEWLT RAAEFDHLFQ TRWLGERFFH LPGDMLALQE LIWRARPDCI VQTGIAAGGG 
VVFSASMLEL TGGHGRVVAI EPRLRDEVRQ RLQSHRLAHR MVLIEGESCA TDTLASVRAR 
IGDGARVMAI LDLTHTHAHV LRELACYAPL VTPGSYAIVM DTIMEYLPES MFDGKPYGRG 
NNPATAVHAF LAGDDRFEVD HDIEDRVLMT LSPGGFLKRV R