| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1695 |
|---|
| Symbol | |
|---|
| ID | 4310302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 1877431 |
|---|
| End bp | 1878495 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638149510 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_773586 |
|---|
| Protein GI | 115351747 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.347986 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGA CGACCCCCGT TTCGCCTTCG TCGCTGCGAC TTCGCTATCG CGCAGTCGCC
GCGCGGCGTG TCGGTGCGCT GGCCGCGCTC GCATGCGTGC TCGTCGCGCT GCTCGTCGTC
GACGTCTCGA CCGGCCCATC GCCGTTTCCG CTCGCCGATG TGGTCGGCGG CCTGTTCCGG
CCCGACGGGC TGCCGCTCGA ACAGCGCGTG ATCCTGTGGG ACGTGCGGCT GCCCTATGCG
CTGATGGCCG TGCTCGTCGG CGCGTCGCTC GGGTTCGCCG GCGCCGAAAT GCAGACCGTG
CTGAACAACC CGCTCGCGAG TCCGTTCACG CTCGGCATGT CGGCCGCCGC GAGCGTGGGC
GCGTCGCTCG TCGTGATTTC CGGCTGGCAC CTCGTGCTGT GGAACGAGAA CGTCGCGCTG
TCGCTCGGCG CGTTCGCGTG CGCGTGCGTC GCGACGCTGC TGATCGTCTG GCTCGCGTGG
CGCCACGGCG CGACGACCGA AACCGTCGTG CTGTTCGGCA TCGGCCTGAT GTTCAGCTTC
GAGGCCCTGC AGTGGCTGCT GCAGTTCATC GCCGACGCAA ATGCGTTGCA GCAGATCGTG
TTCTGGAGCA TGGGCAGCCT GGCGCGCTCG ACGTGGGGCA AGATCGCGCT GTTGACCTGC
GTGTTCACCA CCTGCACGCT GTGGGCGAGC GTCGACGTCG CGTCGTTGAC GGCGCTGCGC
GCCGGCGACG AGCAAGCGCG CAGCATGGGT ATCTCGGTCG AGCGGCTGCG GCTCGTCGCG
CTCGCGCGCA TCAGCCTGCT GTCCGCGACG GCGCTGTCGT TCGTCGGCAC GATCGGTTTC
GTCGGCCTCG TCGGGCCGCA CGTCGCGCGG CTGCTGGTCG GCGACGAGCA TCGCTACTAC
CTGCCGGGCG CGGCGCTCGC CGGCGCGATC ATGCTGGCCA GCGCGTCCGT GCTCAGCAAG
ACGCTGATCC CCGGCGTGAC GCTGCCGATC GGCATCATCA CCGCGCTGGT CGGCGTGCCG
TTGTTCATGC TGCTCGTCAG CCGGCGCGGG AGGCTCCATG GCTGA
|
|---|
| Protein sequence | MSTTTPVSPS SLRLRYRAVA ARRVGALAAL ACVLVALLVV DVSTGPSPFP LADVVGGLFR
PDGLPLEQRV ILWDVRLPYA LMAVLVGASL GFAGAEMQTV LNNPLASPFT LGMSAAASVG
ASLVVISGWH LVLWNENVAL SLGAFACACV ATLLIVWLAW RHGATTETVV LFGIGLMFSF
EALQWLLQFI ADANALQQIV FWSMGSLARS TWGKIALLTC VFTTCTLWAS VDVASLTALR
AGDEQARSMG ISVERLRLVA LARISLLSAT ALSFVGTIGF VGLVGPHVAR LLVGDEHRYY
LPGAALAGAI MLASASVLSK TLIPGVTLPI GIITALVGVP LFMLLVSRRG RLHG
|
|---|
| |