Gene Bamb_1673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1673 
Symbol 
ID4310994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1849021 
End bp1849950 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content63% 
IMG OID638149488 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_773564 
Protein GI115351725 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCGT TCAAGTCCCT GCTCGCATGG CCGGTGCGGC GCTTCAACCT GACCGGCGGC 
TCGGCGGTCG TCGCGGGGCC GTATACATGG CTCGTGCTGT TCTTCCTCGT GCCGTTCGTG
CTGGTCGTGA AGATCAGCTT CGCGGAGCTG CAGCTCGGCA TCCCGCCGTA CACGGAGCTC
GCGTCGTACA CGGACGGCGT GGTGCACATC GCGCTGAACC TGTCGCACTA CGCGTTCCTG
CTCACCGACA GTCTGTATTT CGCGACCTAC GTGAATTCGG TGGTGGTCGC CGCGATCACG
ACGGTGCTGT GCCTGCTGAT CGGCTATCCG ATGGCGTACT ACATCGCGCG TTCGAACCCG
GCGACCCGCA ACCTGCTGAT GATGGGCGTG ATGCTGCCGT TCTGGACGTC GTTCCTGATC
CGCGTGTACG CATGGATCGG GATCCTCAAG AACAACGGGC TGCTGAACAA CTTCCTGATG
TGGATCGGCC TGACCCATAC GCCGATCGAG CTGTACCGCA CCAATTACGC GGTGTACATC
GGGATGGTGT ATTCGTACCT GCCGTTCCTC GTGATGCCGC TGTACGCGCA CCTCGTGAAG
ATGGACCTGC GCCTGCTCGA AGCCGCGTAC GACCTGGGCG CCAGGCCGTG GCGCGCGTTC
GTGCAGATCA CGCTGCCGCT GTCGAGGAAC GGGATCATCG CGGGCTGCCT GCTGGTGTTC
ATTCCGGCGG TCGGCGAGTA CGTGATTCCG GAGCTGCTCG GCGGCGCGAA CACGCTGATG
ATCGGTCGCG TGATGTGGAA TGAGTTCTTC AACAACGCAG ACTGGCCGAT GGCGTCGGCC
GTGACCTGCG CGATGGTGCT GCTGCTGCTC GTGCCGATGG CGATGTTCCA GCACTTCCAG
GCGAAGGAGC AGGAGGGCCG CCGTCGATGA
 
Protein sequence
MNAFKSLLAW PVRRFNLTGG SAVVAGPYTW LVLFFLVPFV LVVKISFAEL QLGIPPYTEL 
ASYTDGVVHI ALNLSHYAFL LTDSLYFATY VNSVVVAAIT TVLCLLIGYP MAYYIARSNP
ATRNLLMMGV MLPFWTSFLI RVYAWIGILK NNGLLNNFLM WIGLTHTPIE LYRTNYAVYI
GMVYSYLPFL VMPLYAHLVK MDLRLLEAAY DLGARPWRAF VQITLPLSRN GIIAGCLLVF
IPAVGEYVIP ELLGGANTLM IGRVMWNEFF NNADWPMASA VTCAMVLLLL VPMAMFQHFQ
AKEQEGRRR