Gene Bamb_1657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1657 
Symbol 
ID4310978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1829925 
End bp1831001 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content70% 
IMG OID638149472 
Producthypothetical protein 
Protein accessionYP_773548 
Protein GI115351709 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACTG CTCCTGCCCC CCATCTCAGC CACGCCGCGC CGTCGATGCG CGGCCAGTTG 
AACGGCGTGC TGTTCGTCGC GCTGTTCGCC GCCGCCGTCA CGAGCCTGTC GGAACTGCCG
GCGATCGCCG GGCTCGGCCT GTCGCCACTG ATCGTCGGGA TCGTCGCCGG CGCGCTGTAC
GGCAACGCAC TGCGCGACGG CATGCCCGCG AGCTGGGCGG CCGGCGTCAA CTTTTCCGCG
CGCAAGCTGC TGCGCATCGC GGTCGCGTTC TTCGGCTTGC GCGTGAGCCT GCAGGAAATC
GCGCAGGTCG GCCTACCCGG CCTGACGGTA TCGGTGCTGG TCGTCGTCAG CACGCTCGTG
ATCGGCACCT GGGTCGGCAT GAAGGTGATG AAGCTCGATC GCGACGCGGC GCTGCTGACC
GCCGCCGGCA GCGCGATCTG CGGCGCGGCC GCCGTGCTCG CGTTCGAGTC GACGCTGCAG
TCGAAGCCGC ACCAGAGCGC GATGGCCGTG GGCAGCGTGG TGCTGTTCGG CACGCTGTCG
ATGTTCCTCT ACCCGCTCGC GTATCACGCC GGCCTGCTCG GCCTCGACCC GACCGGCCTC
GGCCTGTTCT TCGGCGGCAC GATCCACGAG GTTGCGCAGG TGGTCGGCGC GGCGAGCGAC
ATCAGCCCGC AGGTCACGCA CGTCGCGACC ATCGTGAAGA TGACCCGCGT GATGCTGCTG
GTGCCGGTGC TGCTCACGCT CGGCTGGTGG CTCGCCCGCT CCGCCCGCTC GGCCAGCGCG
AGCGCCGACG GCGCGCAAGG CAAACGCAAG GTGGCGGTGC CGTGGTTCGC GCTCGGTTTC
CTCGGCTTCG TGATCGTCAA TTCGCTGAAC GTGCTGCCCG CCGATGTCAC GCATACGCTG
AACCTGCTCG ACACCTTCGC GCTGACGATG GCGATGACCG CGCTCGGCAT CGAGACCCGC
GTGTCGCAGA TCCGCGAAGC CGGCCCCCGC GCCCTGACCA CCGGCCTGAT CCTGTACGTC
TGGCTGATCG CCGGCGGCTA CGGGATCACC TGGGCCGTGC AGCGCTGCCT TGGCTGA
 
Protein sequence
MSTAPAPHLS HAAPSMRGQL NGVLFVALFA AAVTSLSELP AIAGLGLSPL IVGIVAGALY 
GNALRDGMPA SWAAGVNFSA RKLLRIAVAF FGLRVSLQEI AQVGLPGLTV SVLVVVSTLV
IGTWVGMKVM KLDRDAALLT AAGSAICGAA AVLAFESTLQ SKPHQSAMAV GSVVLFGTLS
MFLYPLAYHA GLLGLDPTGL GLFFGGTIHE VAQVVGAASD ISPQVTHVAT IVKMTRVMLL
VPVLLTLGWW LARSARSASA SADGAQGKRK VAVPWFALGF LGFVIVNSLN VLPADVTHTL
NLLDTFALTM AMTALGIETR VSQIREAGPR ALTTGLILYV WLIAGGYGIT WAVQRCLG