| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1557 |
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| Symbol | cobN |
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| ID | 4310217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1723135 |
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| End bp | 1726947 |
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| Gene Length | 3813 bp |
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| Protein Length | 1270 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638149373 |
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| Product | cobaltochelatase subunit CobN |
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| Protein accession | YP_773449 |
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| Protein GI | 115351610 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
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| TIGRFAM ID | [TIGR02257] cobaltochelatase, CobN subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.462367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCTGC TGCGCACCAC GCCGGGCGGC TTCGTCGACG ATACGCAGGG CGTCGTCCGG
ATCGACCAGC AGCCGGCCGA CATCGTGATC CTGAGTTCGG CCGATACGAC CTTGTCGCTG
CTGGCCAGCG TCGTGCCGAA GCTGCCGGCC GGCTTTCCGA GCGTGCGGCT CGCGAACGTC
ACGTTCCTGC GGCAGCCCGC GTCGGTCGAT TTCTATGTCG ACGACGTGCT GCGTCATGCG
AAGACGGTCG TGATCGATCA TCTCGGCGGC GAAGCGTACT GGCCGTACGG GATCGAACAG
GCCGTGTCGC TGGCGTCCAA GCGCCGGCAG CAGCTCGCGA TGTTCTCGGG CGACCTGCAG
GAAGACCCGA ACCTCGTCGC GAAGAGCACG GTCGCGCCGG CGCTGTGCCG GCTGTGGTGG
CGCTACCTGC GCGACGGCGG GATGCACAAC GCCGAAGCGC TGCTGCGCAG CATCGCATTC
CATACGCTCG GCTTCGGCGA CGAACCCGAG CCGCCGCGCC CGCTGCCGGC CGCCGCGCTG
TATCACCCGG CGCGCGACCC GGCGAGCGTC GACGACTGGC GCGCGCGCTG GACGCCCGGC
GCACCCGTGG TCGCGATCCT GTTCTATCGC GCGCACTGGC AGGCCGCGAA CACGGCCGTG
TTCGACGCGC TGGCCGATGC GCTCGTGCGC GAAGGGCTCA ATCCGCTGCC GATCGCGGTC
ACGTCGCTGA AGGACGCGGT GAGCCGCGAG GTCATCACGC AGCTCTGCGA CACGCACGGC
GTCGCGCTCG TGCTGAACAC CACGGCCTTC GCGGCCGGCG CGATCGATAG CCCCGAGCCC
GACATACTCG CCGGCGACGC GCCGGTGCTG CAGGTGATCC TGTCCGGCGG CAACCGCGAC
GCGTGGGTGG CCGACAACCA GGGGCTGCAC GCGCGCGACA TCGCGATGCA CATCGCGTTG
CCTGAAGTCG ACGGGCGCAT CGTCACGCGC GCGGTGAGCT TCAAGGGGCT CGCGTATCGG
TGTCCGCACA CCGAAGTCGA CGTCGTGCGC TACCAGCCGG ACGCCGAACG GATCGCGTTC
GTCGCGGCGC TCGCGCGCGG CTGGTGCCGG CTGCGCACGC TCGACAATGC CGACAAGCGC
ATCGCGCTGA TTCTCGCGAA CTATCCGCAA AGCGAAGGGC GGATCGGCAA CGGCGTCGGG
CTCGACACGC CGGCGTCCGC GCTGCGCGTG CTCGCGGCGC TGCGCGACGC GGGCTATGCG
GTAGCCGACC TGCCGGCCGA CGGCGACGCG CTGATCGCGC GGCTCACCGA AGGCGTGACC
AACGACCCGG CCGTGCGCGC ACTGCGCCCC GCGTTCCAGA GTTTCGCGCT GGCCGATTAC
GTCGCGCATT TCGCGCGGCT GCCGGCCGCC GTGCGCGATG CGCTGAACGA GCGCTGGGGG
CCGCCCGACG CGGACCCGAC GCTGCGCCAA GGGCGCTTCC CGATCGCCGG CTGGCGCGCG
GGCAACGTGT TCGTCGGCAT CCAGCCGTCG CGTTCGCGCG GCGAGAACGA CTATGCGAGC
TACCACGACG CGGACCTCGT GCCGCCGCAC GCTTACCTCG CGTTCTATTT CTGGCTGCGC
GATGCGTTCG GCATCGACGC GGTCATCCAC CTCGGCAAGC ACGGCAACCT CGAATGGCTG
CCGGGCAAGA GCGTCGCGCT GTCCGACGCG TGCTGGCCGG ACCTGACACT CGGGCCGCTG
CCGCATCTGT ATCCGTTCAT CGTCAACGAT CCGGGCGAGG GCAGCCAGGC GAAGCGCCGC
GCGCAGGCCG TGATCATCGA TCACCTGATG CCGCCGCTCA CGCGCGCGGA AAACTACGGC
CCGCTGCAGG ATCTCGAACG GCAGGTCGAC GAATACTACG AAGCGCTGAT GGTCGATGCG
CGGCGCGCGA GGCTGCTGCG CAAGACGATC CTCGCGACGA TCGCCGAACA CCGGCTGCAT
GACGAGCTGA GCGTGTCGCC GCCGCGCGAC GCCGGCGACG AGGACGCGCT GCTCACGCGC
GTCGACGCCT GGCTGTGCGA ATTGAAGGAA GCACAGATTC GCGACGGGCT GCACGTGTTC
GGCGCGTCGC CGCTCGACCG CCAGCGGCGC GATACGCTGC TCGCGCTCGC ACGCTTTCCG
GTCGGCGACG GCAAGGGCGA ACGCGCGGGG CTGATCGCCG CGCTCGCGCG CGATCTCGCG
CTCGGCGACG ATTTCGATCC GCTCGCGGCC GACTGGGCTG CGCCGTGGAC GGGCCCGCGG
CCGGCCGTTC TGCAGGCGCT CGACGCGTCG CCGTGGCGCC ATGCGGGTGA CACGCGCGAG
CGGCTCGAGC GGCTCGCGCA GCAGTGGCTC GATGGACTGT GCCGTGCGAA TGTCGGCGGC
GATGCCGGCA TCGATGCGAC GCCGCCGGGT GCATGGCCGC ACACGCTCGC CGTGCTCGAA
CGCGTGCGCG CGACGCTGCT GCCCGCGCTC GACGCGTGCG GCGGCGAGGA ACTGCGCCAG
CTGCTGCGCG GGCTCGACGG CCGCTTCGTG CCGCCGGGGC CGAGCGGCTC GCCGTCGCGC
GGCCGTCCCG ACGTGCTGCC GACGGGCCGC AACTTCTATT CGGTCGATAC GCGCGCGGTG
CCGACGCAGG CCGCGTGGTC GCTCGGGCTG AAATCCGCGC AGCAGCTGAT CGAACGCCAT
CTGCAGGATC ACGGCGACTA TCCGCGCGCG ATCGGGCTGT CGGTCTGGGG CACGGCCACG
ATGCGCACCG GCGGCGACGA TATCGCGCAG GCCTTCGCGC TCATCGGCGT GCGGCCGAAA
TGGGCGCACG GCAGTCATCG CGTGACCGAC TTCGAGATCC TGCCGATCGA GATCTTCGAC
CGGCCGCGCA TCGACGTGAC GCTGCGCGTG TCGGGCTTCT TCCGCGACGC GTTTCCGAAC
CTGATGCACC TGTTCGACGC GGCCGTGCAG GCCGTCGCCG CGCTCGACGA GCCCGAGGCG
CTGAACCCGA TCCGCGCGCG CATCGAGCGC GAACGCGCGA CCTGGATCGA GCGGGGCGTG
GCGCCCGACG AAGCGCGACG CCGCGCCGGC TGGCGCGTGT TCGGCGCGCG GCCGGGCAGC
TACGGTGCGG GCCTGCAGGA CATGATCGAC CAGCGCCGCT GGCAGACCGA CGCCGATCTC
GCCGCCGCGT ATCGCCAGTG GGGCGGCCAT GCGTACGCGC AGAACAGCGC GGGCGACGCG
GCCCCCGACG TGTTCGGCGA GCGGCTCGCG GCGATCGACG TCGTCGTGCA GAACCAGGAC
AGCCGCGAAC ACGACATCCT CGACTCGAAC GACTACTACC AGTTCCAGGG CGGGATGACG
GCGGCCGTGC GCCACCTGTC CGGCCAGCAG CCGAGCATCT ACCACGGCGA CCATGCGAAC
CCGGTCGCGC CGAAGATGCG CACGCTGCGC GAGGAGATCG CGCGCGTGAT CCGCTCACGC
GTCGTCAACC CGAAATGGCT CGACGGCGTG AAGCGTCACG GCTACAAGGG CGCGGCCGAA
ATGGCCGCGA CCGTCGACTA CCTGTACGGC TATGACGCGA CCGCCCGCGT GCTGTCGGAC
CATCAGTACG CGCTCGTCGC CGACGCGTAC CTGTTCGACG ACGACACGCG TGCGTTCCTC
GAACGACACA ACCCGAAGGC GCTGCACGGC ATCTGCGAAC GCTTTGTCGA AGCGATGCAG
CGCGGGCTGT GGCAGCAGCC GGGCGACTAT CGCGAGCGGA TCGAAGCGGT CTGGCTCGAC
AGCGAACAAC TCCAGGAAGG AGGACGGCGA TGA
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| Protein sequence | MHLLRTTPGG FVDDTQGVVR IDQQPADIVI LSSADTTLSL LASVVPKLPA GFPSVRLANV
TFLRQPASVD FYVDDVLRHA KTVVIDHLGG EAYWPYGIEQ AVSLASKRRQ QLAMFSGDLQ
EDPNLVAKST VAPALCRLWW RYLRDGGMHN AEALLRSIAF HTLGFGDEPE PPRPLPAAAL
YHPARDPASV DDWRARWTPG APVVAILFYR AHWQAANTAV FDALADALVR EGLNPLPIAV
TSLKDAVSRE VITQLCDTHG VALVLNTTAF AAGAIDSPEP DILAGDAPVL QVILSGGNRD
AWVADNQGLH ARDIAMHIAL PEVDGRIVTR AVSFKGLAYR CPHTEVDVVR YQPDAERIAF
VAALARGWCR LRTLDNADKR IALILANYPQ SEGRIGNGVG LDTPASALRV LAALRDAGYA
VADLPADGDA LIARLTEGVT NDPAVRALRP AFQSFALADY VAHFARLPAA VRDALNERWG
PPDADPTLRQ GRFPIAGWRA GNVFVGIQPS RSRGENDYAS YHDADLVPPH AYLAFYFWLR
DAFGIDAVIH LGKHGNLEWL PGKSVALSDA CWPDLTLGPL PHLYPFIVND PGEGSQAKRR
AQAVIIDHLM PPLTRAENYG PLQDLERQVD EYYEALMVDA RRARLLRKTI LATIAEHRLH
DELSVSPPRD AGDEDALLTR VDAWLCELKE AQIRDGLHVF GASPLDRQRR DTLLALARFP
VGDGKGERAG LIAALARDLA LGDDFDPLAA DWAAPWTGPR PAVLQALDAS PWRHAGDTRE
RLERLAQQWL DGLCRANVGG DAGIDATPPG AWPHTLAVLE RVRATLLPAL DACGGEELRQ
LLRGLDGRFV PPGPSGSPSR GRPDVLPTGR NFYSVDTRAV PTQAAWSLGL KSAQQLIERH
LQDHGDYPRA IGLSVWGTAT MRTGGDDIAQ AFALIGVRPK WAHGSHRVTD FEILPIEIFD
RPRIDVTLRV SGFFRDAFPN LMHLFDAAVQ AVAALDEPEA LNPIRARIER ERATWIERGV
APDEARRRAG WRVFGARPGS YGAGLQDMID QRRWQTDADL AAAYRQWGGH AYAQNSAGDA
APDVFGERLA AIDVVVQNQD SREHDILDSN DYYQFQGGMT AAVRHLSGQQ PSIYHGDHAN
PVAPKMRTLR EEIARVIRSR VVNPKWLDGV KRHGYKGAAE MAATVDYLYG YDATARVLSD
HQYALVADAY LFDDDTRAFL ERHNPKALHG ICERFVEAMQ RGLWQQPGDY RERIEAVWLD
SEQLQEGGRR
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