Gene Bamb_1503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1503 
Symbol 
ID4309587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1646380 
End bp1647330 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content65% 
IMG OID638149319 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_773395 
Protein GI115351556 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.137642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTCC TCTTTCGCCG TCGTTTCCTG ACCGCCGCGC TTGCCGCCGT CGCGGTCGCC 
GCCGCACCGG CCGTCCACGC GCAAGCGGGG GCCAAGCCGA AGGTCGCGCT CGTGATGAAG
TCGCTCGCCA ACGAGTTCTT CCTGACGATG GAAACCGGCG CGAAGGAATA CCAGAAGCAC
AACGCCGGCC AGTTCGACCT GATCACGAAC GGCATCAAGG ACGAGACCGA CACCGCGAAC
CAGATCCGCA TCGTCGAGCA GATGATCGTG TCGAAGGTCG ATGCGATCGT GCTCGCGCCG
GCCGATTCGA AGGCGCTCGT GCCGGTCGTG AAGAAGGCGG TCGACGCGGG CATCATCGTC
GTGAACATCG ACAACCGGCT CGACCCCGAC GTGCTGAAGT CGAAGAACCT GAACGTGCCG
TTCGTCGGCC CCGACAACCG CAAGGGCGCG CGCAAGATCG GCGACTACCT CGCGAAGCGG
CTGAAGGCGG GCGACCAGGT CGGTATCCTC GAAGGCGTGT CGACGACGAC CAACGCGCAG
CAGCGCACGG CCGGCTTCCA GGATGCGATG AAGGCGGGCG GGATGAAGGT CGTGTCGGTG
CAGTCGGGCG AGTGGGAGAT CGACAAGGGC AATGCGGTCG CGTCCGCGAT GCTCAACGAA
TACCCGAACC TGCGCGCGCT GCTGTGCGGC AACGACAACA TGGCGATCGG CGCGGTGTCG
GCGGTGCGGG CCGCGGGCAA GCAGGGCAAG GTGTTCGTGG TCGGCTACGA CAACATCAAC
GCGATCAAGC CGATGCTGAA GGACGGCCGC GTGCTCGCGA CCGCCGACCA GTACGCGGCG
AAGCAGGCCG TGTTCGGCAT CGACACGGCG CTCAAGGCGA TTGCCGAGCA TCGCAAGCAG
GCCGACATGA CCGGTGTGGT CGAGACGCCG GTGGATCTCG TGACGAAGTA A
 
Protein sequence
MNVLFRRRFL TAALAAVAVA AAPAVHAQAG AKPKVALVMK SLANEFFLTM ETGAKEYQKH 
NAGQFDLITN GIKDETDTAN QIRIVEQMIV SKVDAIVLAP ADSKALVPVV KKAVDAGIIV
VNIDNRLDPD VLKSKNLNVP FVGPDNRKGA RKIGDYLAKR LKAGDQVGIL EGVSTTTNAQ
QRTAGFQDAM KAGGMKVVSV QSGEWEIDKG NAVASAMLNE YPNLRALLCG NDNMAIGAVS
AVRAAGKQGK VFVVGYDNIN AIKPMLKDGR VLATADQYAA KQAVFGIDTA LKAIAEHRKQ
ADMTGVVETP VDLVTK