| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1428 |
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| Symbol | |
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| ID | 4311528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1577239 |
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| End bp | 1580157 |
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| Gene Length | 2919 bp |
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| Protein Length | 972 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638149241 |
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| Product | chitinase |
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| Protein accession | YP_773320 |
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| Protein GI | 115351481 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3325] Chitinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTCA AATTGAAATC GCATAAACGC ACTCCCAACA TCGTGATCCG ACGCCGTTCG
CAGCGTCGTG CGCACGTTGC CTATGCCGCG CTCGCGGCAG CCAGCGCACT GAGCTTCGCG
AACGCGGCGC TCGCTGCACC CGGCAAGCCC AGTCTGAAGC AGTACGAAAT CACGTCGCAG
CCGCATGGCT TCGTCGAGAT CGACCTGCAG AAGGCAGGCG TTGCGCCGTA CAAGGACCTC
GTCAAGCTGA ACAAGAAGGT CGACGTGCCG CTGCCGTTCG ACATCTGGAG CAACGGCACC
GCCGTGAAGG CGGTCGCGGT GGTCAACGGC GTCGTCGATC CCGCTTCCGA GGTCAAGATG
ACGCCCGGCG GCACGCAAAG CGGCGAGGTG ATCGCGAACG TGAAGACGCC GGGCGTCAAG
AAGATGCAGG TGCGCGTGAT CGACGCCAAC GGTGCGTCGA CCGACAGCGC GCCGCTCGAC
GTGGTCGTGT TCGACACGAT TTCCGAACTC GCGGACGATC TGCCGAACAA CGCAAGCAAG
AACCACAAGC CGTATGCGAA CACGTCCGGT TCGGTGGTCG GCACGTACTT CGCGACGTGG
TCGATCTACG ACCGCAAGTT CAACGTCGAC AACGTACCGG TCGAGAACCT CACGCACATG
CTGTATGGAT TCGTCCCGAT CTGCGGCGGC GCGGACGTGA ACGCGTCGCT CGCGAAGGAT
CTGCCGGGCT CGTTCAACAC GCTGCAGCAG AGCTGCAAGG GGCTACCGGA CTACAGCGTC
GCGATCCATG ACACCTATGG CGAGATGGCC AAGGTATTGC CGGGCCAGAC CGCGAACTCG
AAGCTCAAGG GCGTGCTCGG CCAGATGATG GCCGCGAAGA AGCGCAACCC GAACCTGAAG
ATCCTGCCGT CGATCGGCGG CTGGACGCTG TCCGACCCGT TCTTCCAGAT GCACGATCCG
GCGAAGCGCA AGGTGTTCGT CGACTCGACC GAACAGTTGC TGCGCACCTG GAAGTTCTTC
GACGGCGTCG ACATCGACTG GGAGTTCCCC GGCGGCAAGG GCGTGAACCC GTCGCTCGGC
GATCCGGTGA AGGATGGCCC GCTCTACGTG ACGTTGATGA AGGAACTGCG GCAGATGCTC
GACAAGCTGT CGCAGGAAAC CGGCAGGAAG TACGAGCTGA CGTCGGCGAT CGGCGCGGGC
AAGGACAAGA TCGACGTGGT GAACTACAAG GAAGCCACGA AGTACATGGA CTACATTTTC
GACATGACGT ACGACTTCTA CGGTGCGTTC AGTCTGACGG ATCTGGGTCA TCAAACCGCG
CTGTACGCGC CGGACTGGAA GCCGGACACC GCGTACACGA CGCACAACTC GATCAAGGCG
CTGCTCGCGC AGGGCGTCGA TCCGAAGAAG CTCGTCGTCG GCGCGGCGGC GTATGCGCGC
GGCTGGAACG GCGTGCACGG CTATGCCGAC GGCAATCCGT TCACCGGCAC GGCGACGGGG
CCGCACAAGG GCCAGTGGGA ACCGGGCATC CTCGACTACA AGAAGGTCAA GGCGGAGATG
ATCGGGCCGA ACAACGCCGG CATCAACGGC TACGAGTATC ACTATGACCA GACGGCCGAA
GCGCCGTACG TATTCAACAA GAGTACCGGC GAACTCCTCA CCTTCGACGA CCAGCGTTCG
GTCCTCGCGA AGGGCGACTA CGTGCGCGCC CATCAACTGG GCGGCCTGTT CTCGTGGGAA
ATCGACGCGG ACAACGGCGA CATCCTGAAT GCGATGCATC AGGGCCTCGG CCACGGCGAC
GAAGGCGGCG GCGGTGCGGA GAATCATCCG CCGGTCGCGA ACGCGGGCGC CGACATGACG
GTCACCGGGC CGCAGACGGT GACGCTCGAC GCGTCGAAGT CGCGCGATCC CGACGGCGAC
AAGCTGAGCT TCATGTGGGA ACAGGTCGGC GGCGATCCGC TGAAGCTGGC CAATGCGACG
AGCGCGAAGG CGAGCGCCGA CGTTCCGTCG GTCAAGCAGG ACACGAAATA CACGTTCCGC
GTGACGGTCA CCGATCCGGC CGGCCTGAAG GACACGGCGC AGGTCGTCGT CACCGCGCAG
GCGGATGCGA CGGTCGAACC GCCGCCCGCG GAAAACCGTC CGCCGGTCGC GCAGCTCGGC
GGCCCGGCAA CGGCGCAAGC CGGCCAGGCC GTGACGCTGT CGGCCGCGAA ATCGACCGAC
CCGGACGGCG ACAAGCTGAG CTTCAAGTGG AGCGTCCCGG CCGGCATCGA CGCGAAGCCG
ACCGGCGCGA CGCTGAGCTT CACCGCACCT GAGCTCGCGA AGGACCAGTC GTTCACGTTC
TCGGTCACGG TCAGCGACGG CAAGCTGTCG AGCACGGCGA AGCACACCGT CCTCGTCAAG
GCGAAGGATG CGGGCGGTGG CGAAGGTGGT GGCGAAGGCG GCAACGGTGG CGGCGAGTAT
CCGGCGTACA AGGCCGGTAC GCAGTACAAC GCCGGCGACA TCGTGTCGAA CCTCGGCAAG
CTGTATCAGT GCAAGCCGTT CCCGAACAGC GGCTGGTGCT CCGGCGCGCC GACGGCGTAC
GAACCGGGCA AGGGCTTCGC ATGGAGCGAC GCGTGGACGC TTTACGGTGA CGACGAAGGC
GGCAACGGTG GTAACGGTGG TAACGGTGGC GGCAACGGCG GCGGCGAAGG TGGCAACGGT
GGCGGCAATG GCGGCGGCGA AGGCGGCAAC GGCGGCGGCG ATCATCCGCA GTACAAGGAA
GGCACGAAGT ACAACGCCGG CGATATCGTC TCCAACAATG GCAAGCTGTA CCGCTGCAAG
CCGTTCCCGT ACACCAACTG GTGCTCGATG GCGGCCTGGG CTTACGAGCC GGGCAAGGGT
ACTGCGTGGG ACCAGGCATG GGAGGCGCAC AACGAGTAA
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| Protein sequence | MAFKLKSHKR TPNIVIRRRS QRRAHVAYAA LAAASALSFA NAALAAPGKP SLKQYEITSQ
PHGFVEIDLQ KAGVAPYKDL VKLNKKVDVP LPFDIWSNGT AVKAVAVVNG VVDPASEVKM
TPGGTQSGEV IANVKTPGVK KMQVRVIDAN GASTDSAPLD VVVFDTISEL ADDLPNNASK
NHKPYANTSG SVVGTYFATW SIYDRKFNVD NVPVENLTHM LYGFVPICGG ADVNASLAKD
LPGSFNTLQQ SCKGLPDYSV AIHDTYGEMA KVLPGQTANS KLKGVLGQMM AAKKRNPNLK
ILPSIGGWTL SDPFFQMHDP AKRKVFVDST EQLLRTWKFF DGVDIDWEFP GGKGVNPSLG
DPVKDGPLYV TLMKELRQML DKLSQETGRK YELTSAIGAG KDKIDVVNYK EATKYMDYIF
DMTYDFYGAF SLTDLGHQTA LYAPDWKPDT AYTTHNSIKA LLAQGVDPKK LVVGAAAYAR
GWNGVHGYAD GNPFTGTATG PHKGQWEPGI LDYKKVKAEM IGPNNAGING YEYHYDQTAE
APYVFNKSTG ELLTFDDQRS VLAKGDYVRA HQLGGLFSWE IDADNGDILN AMHQGLGHGD
EGGGGAENHP PVANAGADMT VTGPQTVTLD ASKSRDPDGD KLSFMWEQVG GDPLKLANAT
SAKASADVPS VKQDTKYTFR VTVTDPAGLK DTAQVVVTAQ ADATVEPPPA ENRPPVAQLG
GPATAQAGQA VTLSAAKSTD PDGDKLSFKW SVPAGIDAKP TGATLSFTAP ELAKDQSFTF
SVTVSDGKLS STAKHTVLVK AKDAGGGEGG GEGGNGGGEY PAYKAGTQYN AGDIVSNLGK
LYQCKPFPNS GWCSGAPTAY EPGKGFAWSD AWTLYGDDEG GNGGNGGNGG GNGGGEGGNG
GGNGGGEGGN GGGDHPQYKE GTKYNAGDIV SNNGKLYRCK PFPYTNWCSM AAWAYEPGKG
TAWDQAWEAH NE
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