Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1396 |
Symbol | |
ID | 4309620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1538202 |
End bp | 1539887 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638149207 |
Product | polypeptide-transport-associated domain-containing protein |
Protein accession | YP_773288 |
Protein GI | 115351449 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.304051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCCA GATTCGATAC ATGGATGATG CTGCTCGCCA TCGCAGCAGC AGGCACGGCA CAGGCACAGA CGCGCGCAGC AGGCAACCCG CTCGATTCCC TCCCCCAGAT CAACGCGCCG AAGAAAGGGC CGAGCGTCAC CGTGCAGGTC GCGCCGCAGG CACCGCAGTT GCAGGAGCTG CTGTCGCGGC ACGTGACACC GACAACGTTC CAGGTCGAAG GCGTGAAGTC GGTGCCGTTC GACGAAATCT CGCGTCGCTT CACGCCCCTC GTCGGCAAGG ACATCACGAT CGGCGAGCTT ATCGAAACCG CCAACGGCGT GACCAAGCTG TACCAGGATC GCGGCTATGC GCTGTCGTTC GCGTTCATTC CCGCGCAGAC GTTCGAGAAC GGCGTCGTGC GCGTCACGGT CGTCGAAGGC TACGTGTCGG ACGTCAAGGT CACCGGCAAG CCCGGCGCGA TGGAATCGAA GATCCGCGCG ATCGCCGCGC ACATCACGGC CGATCGCCCG CTGCGCCGCG CGACGTTCGA ACGCTACGTG AACACCTTCG GCCTCCTGCC CGGCGTCACG GTGAAGGCCA ACGTGCCGCC GCCGCAAACG ACCGACGGCG CGACGACGCT CGAACTCGCC GTCGACCGCA AGGCATTCAA CATCAGCACC GGCATCGATT TCAATCACCC GGGCGTCCAG GGGCTCATCA CCGCGACCGA GAATGGCCTC ACGTCGTTTG GCGAGCAATT GAGCATTTCC GCACTGGTGC CGCCCGGCCG CGACAAGCAG ACCTACGTCG CATTCAGCGG CGCGGTGCCG GTCGGCAGCA GCGGCCTGGT CACGCGCCTC GACGCCAGCA CGTATCGCGG CAAGCCGACC GACAACCCGG GCCTGCCGTC GACCGTCGAG CGGACGGTCA AGAACGAGAA GCTCGGTCTT TCGGCATCCT ATCCGTTGCT GCTGAACAAC CAGCGCAGCC TGCTCGGCAC CGTGTCGGGC TATGCGTCGC ACAACGAAGA CCGCTACCAG AACACGATCA CCGGCAACAG CATCGACACG CGCTCGCAGG TCCGCGTGCT GCAGATGCAG CTCGACTACA CGAGCGTGTC GGCCAAGCAG GTTCAGAAAC TCAGCGTCAA CGTCGCGAAG GGCTTCAACA TTCTCGGCGC GTCGAAATCG CAGGACATCA CGATCGGCTC GAACACGACA TCGGTGGACA GCCCGATTTC GCTGACGTTC GTGCGCACCG GTGCGACCTT CACGCAGACC AACGAATGGC CGTTCAAGAT CGGCACGTCG GTGTCGCTGA CCGGCCAGTA CAGCCCCGAT TCGCTGCCGA CGTCCGAACA GATCTCGTTC GGTTCGACAC GCTATGCGCT CGGCTACCAA CCGGGCGAAA CGTCGGGCGA CTCGGGATGG GGGATGTCGC TGGAGGTCAA TCGCGCCTTC ACGCCGGGCT GGACGTACAT GAAGTCGATC ACGCCGTACA TCGCTTATGA CAGGGCACGT GTGTACCTGC ATACGGGCAC GCCGTCGCCG AGCCGCTTGT CGTCGGTCGG TATCGGCGTA CGGTTTTCGG ACAGCCGCTA CTACAGTCTC GACCTGAATA TCGCGAAGCC GGTCGGCGAT GCACCCGTTG AAAGCGCATC GCGCAGCCCG CGCGTGAATG CCGCGTTCTC GTATCAGTTG AACTGA
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Protein sequence | MKSRFDTWMM LLAIAAAGTA QAQTRAAGNP LDSLPQINAP KKGPSVTVQV APQAPQLQEL LSRHVTPTTF QVEGVKSVPF DEISRRFTPL VGKDITIGEL IETANGVTKL YQDRGYALSF AFIPAQTFEN GVVRVTVVEG YVSDVKVTGK PGAMESKIRA IAAHITADRP LRRATFERYV NTFGLLPGVT VKANVPPPQT TDGATTLELA VDRKAFNIST GIDFNHPGVQ GLITATENGL TSFGEQLSIS ALVPPGRDKQ TYVAFSGAVP VGSSGLVTRL DASTYRGKPT DNPGLPSTVE RTVKNEKLGL SASYPLLLNN QRSLLGTVSG YASHNEDRYQ NTITGNSIDT RSQVRVLQMQ LDYTSVSAKQ VQKLSVNVAK GFNILGASKS QDITIGSNTT SVDSPISLTF VRTGATFTQT NEWPFKIGTS VSLTGQYSPD SLPTSEQISF GSTRYALGYQ PGETSGDSGW GMSLEVNRAF TPGWTYMKSI TPYIAYDRAR VYLHTGTPSP SRLSSVGIGV RFSDSRYYSL DLNIAKPVGD APVESASRSP RVNAAFSYQL N
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