Gene Bamb_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1392 
Symbol 
ID4309616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1534293 
End bp1535723 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content65% 
IMG OID638149203 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_773284 
Protein GI115351445 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAGG AATTTGACGT CGTCGTGATC GGCGCCGGCC CCGGTGGCTA CATCGCCGCG 
ATTCGCGCCG CGCAGCTCGG CAAGACCGTT GCCTGTATCG AGAAGTGGAA GAACCCGGCC
GGCGCGCTGA AGCTCGGCGG CACCTGCCTG AACGTCGGCT GCATTCCGTC GAAGGCGCTG
CTCGCGTCGT CGGAGGAGTT CGAGAACACG TCGCATCACC TGGCCGACCA CGGCATCACG
GTCGACGGCG TGAAGATCGA CGTCGCGAAG ATGCTCGGCC GCAAGGACGC GATCGTCGAG
AAGATGACGA GCGGGATCGA GTTCCTGTTC AAGAAGAACA AGATCACCTG GCTGAAGGGC
CATGGCAAGT TCACCGGCAA GACCGACGCC GGTGTGCAGA TCGAAGTGAG CGGCGAAGGT
GAAACCGAAG TCGTCACCGC GAAGAACGTG ATCATCGCGA CGGGCTCGAA GGCGCGTCAC
CTGCCGAACG TCCCGGTCGA CAACAAGATC GTGTCGGACA ACGAAGGTGC GCTGACGTTC
GAGTCGGTGC CGAAGAAGCT CGCCGTGATC GGCGCGGGCG TGATCGGCCT CGAGCTCGGC
TCGGTGTGGC GTCGCCTCGG TGCCGAAGTG ACGGTGCTCG AAGCGCTGCC GGCGTTCCTC
GGCGCGGCCG ACGAAGCGCT CGCGAAGGAA GCGGCCAAGC TGTTCAAGAA GCAGGGCCTC
GACATCCATC TCGGCGTGAA GATCGGTGAC GTGAAGACGA CCGCAGATGG CGTGTCGATC
GCTTACACGG ACAAGGACGG CAACGCGCAG ACGCTCGACG CCGACCGCCT GATCGTGTCG
GTCGGCCGCG TGCCGAACAC CGACAACCTC GGCCTCGAGG CAATCGGCCT GAAGGCGAAC
GAGCGCGGCT TCATCGACGT GGACGACCAC TGCCGTACGG CCGTGCCGAA CGTCTACGCG
ATCGGCGACG TGGTGCGCGG CCCGATGCTC GCGCACAAGG CGGAAGACGA AGGCGTGCTG
GTCGCGGAAG TGATCGACGG CCAGAAGCCG CACATCGACT ACAACTGCAT TCCGTGGGTG
ATCTACACGT ACCCGGAAAT CGCCTGGGTC GGCAAGACGG AGCAGCAGCT GAAGGCCGAA
GGCCGCGAGA TCAAGTCGGG CAAGTTCCCG TTCTCGATCA ACGGTCGCGC GCTCGGCATG
AACGCGCCGG ACGGTTTCGT GAAGATGATC GCGGACGCGA AGACCGACGA ACTGCTCGGC
GTGCATGTGA TCGGGGCGAA CGCGTCGGAC CTGATCGCCG AAGCCGTGGT GGCGATGGAG
TTCAAGGCGG CGTCGGAAGA CATCGCACGC ATCTGCCATC CGCACCCGTC GATGTCGGAA
GTGATGCGCG AAGCGGCGCT CGCCGTCGAC AAGCGCTCGC TGAACAGCTG A
 
Protein sequence
MSKEFDVVVI GAGPGGYIAA IRAAQLGKTV ACIEKWKNPA GALKLGGTCL NVGCIPSKAL 
LASSEEFENT SHHLADHGIT VDGVKIDVAK MLGRKDAIVE KMTSGIEFLF KKNKITWLKG
HGKFTGKTDA GVQIEVSGEG ETEVVTAKNV IIATGSKARH LPNVPVDNKI VSDNEGALTF
ESVPKKLAVI GAGVIGLELG SVWRRLGAEV TVLEALPAFL GAADEALAKE AAKLFKKQGL
DIHLGVKIGD VKTTADGVSI AYTDKDGNAQ TLDADRLIVS VGRVPNTDNL GLEAIGLKAN
ERGFIDVDDH CRTAVPNVYA IGDVVRGPML AHKAEDEGVL VAEVIDGQKP HIDYNCIPWV
IYTYPEIAWV GKTEQQLKAE GREIKSGKFP FSINGRALGM NAPDGFVKMI ADAKTDELLG
VHVIGANASD LIAEAVVAME FKAASEDIAR ICHPHPSMSE VMREAALAVD KRSLNS