Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1381 |
Symbol | nusA |
ID | 4309605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1516491 |
End bp | 1517966 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638149192 |
Product | transcription elongation factor NusA |
Protein accession | YP_773273 |
Protein GI | 115351434 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA [TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.113338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGCG AAGTGTTGAT GCTGGTGGAT GCGCTGGCGC GCGAGAAAAA CGTCGACAAG GATGTGGTGC TGGGCGCCCT CGAGGCTGCG CTCGCGTCCG CTTCCAAGAA GCTGTTCGAC GAAGGCGCCG AAATCCGCGT CCATATCGAT CGCGAAAGCG GCGAGCACGA AACCTTCCGT CGCTGGCTCG TCGTCCCTGA CGAGGCAGGC TTGCAGGAGC CGGATCGCGA GATCCTGCTG TTCGAAGCGC GTGAGCAGAA CCCCGACGTC GAAGTCGGCG AATTCGTCGA GGAGCCGGTG CCGTCGATCG AGTTCGGCCG TATCGGCGCG CAGGCCGCCA AGCAGGTGAT CCTGCAGAAG GTGCGCGATG CCGAGCGCGA GCAGATCCTG AACGACTACC TCGAGCGCGG CGAAAAGATC ATGACGGGCA CGGTGAAGCG CCTCGACAAG GGCAACTTCA TCGTCGAATC GGGCCGTGTC GAAGCGCTGC TGCGCCGCGA CCAGCTGATT CCGAAGGAAA ACCTGCGCGT GGGCGACCGC GTGCGTGCGT ACATCGCGAA GGTCGACCGC ACCGCGCGCG GTCCGCAGAT CGAACTCTCG CGCACGGCGC CCGAGTTCCT GATGAAGCTG TTCGAGATGG AAGTGCCGGA AATCGAGCAG GGCCTGCTCG AGATCAAGGC AGCCGCTCGC GATCCGGGCG TGCGCGCGAA GATCGGCGTG ATCGCCTACG ACAAGCGGAT CGATCCGATC GGTACCTGCG TCGGCATCCG CGGCTCCCGC GTGCAGGCCG TGCGCAACGA GCTTGGTGGC GAAAACATCG ACATCGTGCT ATGGTCCGAG GATCCCGCCC AGTTCGTGAT CGGCGCGCTC GCGCCGGCAG CCGTCCAGTC GATCGTCGTC GATGAAGAAA AGCACTCGAT GGACGTCGTC GTCGACGAGA ACGAGCTGGC TGTCGCGATC GGCCGCAGCG GTCAGAACGT TCGCCTTGCC GGCGAACTGA CCGGCTGGCA GATCAACATC ATGACGCCGG ACGAATCCGC CCTGAAGCAG GGTGAAGAGC GCGATCGACT GCGTGCGCTC TTCATGGCGC GTCTCGACGT CGACGAAGAA GTTGCCGATA TCCTGATCGA CGAAGGCTTC ACGAGCCTCG AAGAGATCGC TTACGTGCCG CTCAACGAAA TGCTCGAAAT CGAGGCATTC GACGAGGACA CCGTGCACGA GCTGCGCAAC CGCGCACGCG ACGCACTGTT GACGATGGCG ATCGCCAACG AAGAAAAGGT CGAAAACGCA GCGCTGGATT TGAAGGGCCT CGACGGCGTC ACGCCGGAGT TGCTCGCAAA GCTGGCCGAA CACGGCATGC AGACGCGGGA CGATCTCGCC GAGCTGGCTG TGGATGAACT GGTCGATATG ACCGGGATGG AAGAGGATGC CGCTAAGGCG TTGATCATGA AAGCACGTGA ACACTGGTTC CAGTGA
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Protein sequence | MSREVLMLVD ALAREKNVDK DVVLGALEAA LASASKKLFD EGAEIRVHID RESGEHETFR RWLVVPDEAG LQEPDREILL FEAREQNPDV EVGEFVEEPV PSIEFGRIGA QAAKQVILQK VRDAEREQIL NDYLERGEKI MTGTVKRLDK GNFIVESGRV EALLRRDQLI PKENLRVGDR VRAYIAKVDR TARGPQIELS RTAPEFLMKL FEMEVPEIEQ GLLEIKAAAR DPGVRAKIGV IAYDKRIDPI GTCVGIRGSR VQAVRNELGG ENIDIVLWSE DPAQFVIGAL APAAVQSIVV DEEKHSMDVV VDENELAVAI GRSGQNVRLA GELTGWQINI MTPDESALKQ GEERDRLRAL FMARLDVDEE VADILIDEGF TSLEEIAYVP LNEMLEIEAF DEDTVHELRN RARDALLTMA IANEEKVENA ALDLKGLDGV TPELLAKLAE HGMQTRDDLA ELAVDELVDM TGMEEDAAKA LIMKAREHWF Q
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