Gene Bamb_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1369 
Symbol 
ID4311286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1504955 
End bp1506163 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content65% 
IMG OID638149180 
Productuncharacterized lipoprotein-like protein 
Protein accessionYP_773261 
Protein GI115351422 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3317] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATC TTCGTCTTAC CATGCGGTTC GCTGCAGTGC TCGCCACTGG CGCGCTCGTC 
GCCGGTTGCG GTACGTCGTC GCCCACGAAA GTGGACTACA AGAGCGATTC GAAATCGAAG
GAAGCGTCGC TCGCAGTGCC GCCCAACATG CTTGACGAGA CGGCCGATCA GCGTTCGCTG
CCGCCGCAGG GCGGCGCGAC TTCCCTGTCT GCGCTTCAGC AGGTCCAGCA CGCGGCACCC
GCGCTGGACA CCGTCGCGCC CGCCGTGTCC GGCATGCATA TCCAGCGCGA CGGCACCGAG
AGCTGGCTCG TGATCGACGG CAAGAAGCCC GCCGACATCT GGCCGCAGGT TCGCCGCTTC
TGGCAGGAGC AGGGCTTCCT GCTCGTCGTC GACCAGCGCG ACAAGGGCGT GATGGAAACC
GACTGGAACG AGACCCATCC GCAGATCAAC GACGGCCTGA TCCGTAGCGT GATCACGAAG
GCGATGGGCA ACTCGTACGT GACGGCCGAG CGCAACAAGT ACCGCACGCG CCTCGATTCG
GCCCCGAACG GCGGCACTTA CGTGTTCATC AGCCAGAAGG GCATGCGCGA GGCGATCACC
GGTGCGAACA ACGATTCGAG CAAGTGGGAA GCGAAGCCGA ACGATCCGGC GCTCGAGACG
GAATACCTGA AGCGGCTGAT GGCAGTGCTC GCCCAGAACG AGCAGCGCGC GAAGAACGGC
GAGCCGCCGA TCGCGAACAT CAACGACAAC ACGGTGCCGA AGGACAAGAA GGCGGACACC
GACGCATCGA AGGCAGCCGC CGCGGCGATC GCCGCGCAGA ACGTCGCGCG TACGTCGTCG
CAAGCGAACG ACGTCGACTC GGCTGCGGTG CCGTCCGAAG TCACGCTCGG CGAGCCGTAC
GACCGTTCGT GGCTGCACGT CGGCCTCGCG CTCGATCGCG CGAACTTCAC GGTCGACGAT
CGCGATCGCA CGAAGGGCCT GTATTTCGTG CGTTATGTCG ATCCGAAGGA CATCAGCGCG
GCCGAGCAGG GCTTCTGGAG CCAGCTGTTC CACGGCAAGA AGGAAAAGCA GGCAAAGCAG
TATCGCGTCA ACGTGAAGGC GCTGTCGTCC GACCAGACGC GCGTCGCAGT CGTCGACGAT
TCGGGTGCGA TCGATACGTC GACGCCCGCC CGGCAAATCA TGGGGCTGCT CGTGAATCAG
CTGCGCTGA
 
Protein sequence
MTDLRLTMRF AAVLATGALV AGCGTSSPTK VDYKSDSKSK EASLAVPPNM LDETADQRSL 
PPQGGATSLS ALQQVQHAAP ALDTVAPAVS GMHIQRDGTE SWLVIDGKKP ADIWPQVRRF
WQEQGFLLVV DQRDKGVMET DWNETHPQIN DGLIRSVITK AMGNSYVTAE RNKYRTRLDS
APNGGTYVFI SQKGMREAIT GANNDSSKWE AKPNDPALET EYLKRLMAVL AQNEQRAKNG
EPPIANINDN TVPKDKKADT DASKAAAAAI AAQNVARTSS QANDVDSAAV PSEVTLGEPY
DRSWLHVGLA LDRANFTVDD RDRTKGLYFV RYVDPKDISA AEQGFWSQLF HGKKEKQAKQ
YRVNVKALSS DQTRVAVVDD SGAIDTSTPA RQIMGLLVNQ LR