Gene Bamb_1359 details

Gene Information

• Locus tag: Bamb_1359
• Symbol: thrS
• ID: 4311276
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 1493119
• End bp: 1495026
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 638149169
• Product: threonyl-tRNA synthetase
• Protein accession: YP_773251
• Protein GI: 115351412
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTTCGA TACGCTTGCC TGACGGCTCA GTTCGACAAT ACGAGCATCC GGTGACAGTT 
GCCGAGGTTG CAGCCTCGAT CGGTCCCGGC CTCGCGAAGG CTGCGCTTGG AGGCAAGCTC 
GACGGCGAGC TCGTCGACAC GTCCACGGTC ATCGATCGCG ACGCAGCGCT CGCGATCATC 
ACGGACAAGG ATGCCGACGG TCTCGACATC ATCCGTCACT CGACCGCGCA CTTGCTCGCG 
TACGCGGTGA AGGAACTGTA TCCGGATGCG CAGGTGACGA TCGGTCCCGT GATCGACAAC 
GGCTTCTACT ACGACTTCTC GTATAACCGC CCGTTTACGC CCGAAGATCT GGAAAAGATC 
GAAAAGCGCA TGCAGGAAAT CGCGAAGAAG GACGAGCCGG TGACGCGCCG CGTCGTGTCG 
CGCGACGAGG CGGCCGGCTA TTTCCGCAGC ATCGGCGAGA AGTACAAGGC CGAGATCATC 
GAATCGATTC CGCAAACCGA CGAAATCAAG CTGTACTCGC ACGGCGGCTT CACGGATCTG 
TGCCGCGGCC CGCACGTGCC GTCGACCGGC AAGCTGAAGG TCTTCAAGCT GATGAAGGTC 
GCGGGCGCGT ACTGGCGCGG CGACTCGAAG AACGAGCAGC TGCAGCGCAT CTACGGTACG 
GCCTGGACGA AGAAGGAAGA CCAGGACCAA TACCTGCACA TGCTCGAGGA AGCGGAAAAG 
CGCGACCACC GCAAGCTCGG CAAGCAGCTC GACCTGTTCC ACATGCAGGA AGAGTCTCCG 
GGCATGGTGT TCTGGCATCC GAAGGGCTGG GCGCTGTGGC AGCAGGTCGA GCAGTACATG 
CGCCGCCGCG TGAACGACGC CGGCTACCTC GAGATCAAGA CGCCGATGAT CATGGACCGC 
TCGCTGTGGG AAGCGTCGGG CCACTGGCAG AACTACCGCG AGAACATGTT CACGACGGAG 
TCGGAGAAGC GCGACTACGC GATCAAGCCG ATGAACTGTC CGGGGCACGT TCAGGTGTTC 
AAGCACGGTC TGCGCTCGTA CCGCGACCTG CCGCTGCGCT ACGCGGAATT CGGTTCGTGC 
CACCGCAACG AGGCATCGGG CGCGCTGCAT GGCCTGATGC GCGTGCGCGG CTTCGTGCAG 
GACGATGCGC ACATCTTCTG TACGGAAGAG CAGTTCATCG CCGAGTCGAT CGCGTTCAAT 
ACGCTGGCGA TGAGCGTGTA CAAGGATTTC GGGTTCGAGC ACATCGACAT CAAGCTGTCG 
CTGCGCCCCG AACAGCGTGC GGGCACGGAT GAGACGTGGG ATCGTGCCGA GCAGGGCCTG 
CGCGACGCGC TGACGGCGTG CGGCCTGTCG TGGGAAGAGC TGCCGGGCGA AGGTGCGTTC 
TATGGTCCGA AGATCGAGTA CCACATCAAG GACGCGCTCG GCCGGTCGTG GCAGTGCGGC 
ACGCTGCAGC TCGACATGGT GCTGCCGGAG CGCCTCGGTG CCGAGTACGT CGCGGAGGAC 
AACAGCCGCC GCCGGCCGGT GATGCTGCAC CGTGCGATCG TCGGTTCGAT GGAGCGATTC 
CTCGGCATTC TGATCGAGCA CCATGCCGGC GCGATGCCGG CCTGGCTCGC GCCGTTCCAG 
GCAGTTGTGC TCAATATCGC CGAAAGTCAG GTGGAATATG CACACTCTCT GACCCAAACG 
TTGCAAAAAC AAGGGGTTAG GGTGGCGGGC GATTTGCGCA ACGAGAAGAT TAGCTATAAA 
ATACGCGAGC ACACGCTGGA AAAGGTGCCT TATCTCCTCG TCGTGGGTGA TAAGGAGCGT 
GATGCGCAAA CGGTAGCCGT GCGTGCCCGT GGCGGCGTCG ATCTTGGCGT TATGCCGATC 
GAAGCCTTCG TTGAGCGTCT GCAGGAAGAC CTGCGCTCGT TCAAGTAA 

 

Protein sequence

MVSIRLPDGS VRQYEHPVTV AEVAASIGPG LAKAALGGKL DGELVDTSTV IDRDAALAII 
TDKDADGLDI IRHSTAHLLA YAVKELYPDA QVTIGPVIDN GFYYDFSYNR PFTPEDLEKI 
EKRMQEIAKK DEPVTRRVVS RDEAAGYFRS IGEKYKAEII ESIPQTDEIK LYSHGGFTDL 
CRGPHVPSTG KLKVFKLMKV AGAYWRGDSK NEQLQRIYGT AWTKKEDQDQ YLHMLEEAEK 
RDHRKLGKQL DLFHMQEESP GMVFWHPKGW ALWQQVEQYM RRRVNDAGYL EIKTPMIMDR 
SLWEASGHWQ NYRENMFTTE SEKRDYAIKP MNCPGHVQVF KHGLRSYRDL PLRYAEFGSC 
HRNEASGALH GLMRVRGFVQ DDAHIFCTEE QFIAESIAFN TLAMSVYKDF GFEHIDIKLS 
LRPEQRAGTD ETWDRAEQGL RDALTACGLS WEELPGEGAF YGPKIEYHIK DALGRSWQCG 
TLQLDMVLPE RLGAEYVAED NSRRRPVMLH RAIVGSMERF LGILIEHHAG AMPAWLAPFQ 
AVVLNIAESQ VEYAHSLTQT LQKQGVRVAG DLRNEKISYK IREHTLEKVP YLLVVGDKER 
DAQTVAVRAR GGVDLGVMPI EAFVERLQED LRSFK