| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1358 |
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| Symbol | |
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| ID | 4311275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1490457 |
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| End bp | 1492676 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638149167 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_773250 |
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| Protein GI | 115351411 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0562025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGT CCGTTACCGC TTCTTCCGTC GCGGCGCCGT CGTTCGACGA CGTGCTCGCG
TTCGTGCGCG AGCGGGCCGG CGACGCGCGC CTGTCGACGG GCGAACTGCT CGCCGATCAC
TCGGCGGGCA CCGCATCGAT CATGCGCACG TTGAACGTCG ACCCGCACGC GATGCAGGCG
GCCGCGCTGT TCGTGCTGAC GCCGCATCTG AACGATCCCG AGCGGGAACT GACCGAACGG
TTCGGCGAAG AGGTCGCGCG GCTCGTGTCC GACGTGCGCA AGCTGCTGCG GCTCGGCACC
GTCAGCCTGC GCGCCCAGAA TGCGATGCCT GAAGCCGGGC GCGACGCGGC GGAAGAGCGG
CGCACGCAGA TCGAGGCGCT GCGCAAGATG CTGCTGGCGT TCGCGCAGGA CATCCGCGTG
GTGCTGATCC GGCTGGCGTC GCGGTTGCAG TCGCTGCGGT ATTACGCGGC GGCGAAGATC
GATCCGCCGC CCGACGTCGC GCGCGAGACA CTCGAGATCT ACGCGCCGCT CGCGAACCGT
CTCGGCATCT GGCAACTGAA GTGGGAACTC GAGGATCTCG CGTTCCGCTT CGAGGATCCG
GTCACCTACA AGCGCATCGC CAAGCTGCTC GACGAGAAGC GCATCGAGCG CGAGGCGTAC
GTCGCGCAGG CGATCGAGCG GCTCCAGCAC GAACTGGCGG AAGCGCACAT CCCGGCCGAC
GTGAGCGGGC GGCCGAAACA TATCTACAGC ATCTGGCGCA AGATGCGCGG CAAGGAGCTC
GACTTCGCCG AGCTGTACGA CGTGCGGGCG TTTCGCGTGA TCGTGCCGGA CATCAAGGAT
TGCTACGCGG TGCTCGGCAT CGTGCATCAC CTGTGGCAGC CGGTGCCGAA GGAATTCGAC
GACTACATCT CGCGCCCGAA GCCGAACGGC TACAAGTCGC TGCATACGGT CGTGATCGGC
GACGACGGCC GCGCGTTCGA GGTGCAGATC CGCACGCAGG AAATGCACCG CTTCGCGGAG
TACGGGATCG CCGCGCACTG GCGCTACAAG GAAGCCGGCG CACGCGGCTA TGGCGGCCAG
TTCTCGGCGA GCGACAAGTA CGACGAGAAG ATCGCGTGGC TGCGCCAGCT GCTCGCATGG
AAGGACGACG TCGAAGTGTC GGGCGACCAG GCGTGGGCCC AGCTGCGCGA GACGTCGCTC
GACGACGACC ACATCTACGT GCTGACGCCG CAGGCGCGCG TGATCGCGCT GCCGCAGGGG
GCGACGCCGG TCGATTTCGC GTACCACCTG CACAGCGAGC TCGGCCATCG CTGCCGCGGC
GCGCGCGTCG ACGGCGTGAT GGTGCCGCTG AACACGTCGC TCGCGAACGG CCAGACGGTC
GAGATCGTCG CGGTGAAGGA GGGCGGCCCG TCGCGCGACT GGCTGAACCT GCAGCTCGGC
TACCTGAAGA GTTCGCGTGC GCGACAGAAG GTGCGCGCGT GGTTCAACTC GATCGAGCAG
GAAGAGAACA TCGCGCATGG CCGCGCGCTC GTCGAAAAGA CGCTGCAGCG CGAGGGCAAG
ACGTCGGTCA ATCTCGACAA CCTCGCCGCG AAGCTCGGCT TCAAGTCGCC CGACGAACTG
TTCTCGGTCG TGGGCAAGGA AGAATTCAGC CTGCGCCACG TCGAGCAGGC GCTGTCCGAT
GCGCCGCCGC CCGAGCATGC GCCCGAGGCG CCCGCCGATT TCGAGAAGCG CAGCAGCGGG
GCGAGTGTCG CGCACGGCGC GTCGACCGGC GTGCTGGTGG TCGGCGTCGA TGCGCTGTTG
ACCCAGCTTG CGCGCTGCTG CCGTCCGGCG CCGCCCGACC CGATCAGCGG TTTCGTCACG
CGCGGCAAGG GAATGTCGAT TCACCGCAGC GACTGCCCCA CCTTCCGGCG GATGGCCGAA
CGGGCGCCGG AGCGCGTGCT GCAGACGACC TGGTCGGCCG ATGTGCTGGG CGGACGCGGC
GCGTCCGTCT ATCCGGTCGA CCTGATGATC GAGGCAAGCG ACCGGCAAGG CTTGCTGCGT
GACATCTCCG AAGTGTTCGC GCGCGAAAAA ATGAACGTGG TGGGCGTGAA GACGCAGAGC
CGCCGCAATG CGGCGTTCAT GCAGTTCACG GTCGAGGTGT CGAATTCCGC GCAGGTGCAG
CGTGCGTGCA CGCTGCTTGG CGAAGTGGCG GGCGTCGTGC GGGCGGGGCG CAAGACGTGA
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| Protein sequence | MTESVTASSV AAPSFDDVLA FVRERAGDAR LSTGELLADH SAGTASIMRT LNVDPHAMQA
AALFVLTPHL NDPERELTER FGEEVARLVS DVRKLLRLGT VSLRAQNAMP EAGRDAAEER
RTQIEALRKM LLAFAQDIRV VLIRLASRLQ SLRYYAAAKI DPPPDVARET LEIYAPLANR
LGIWQLKWEL EDLAFRFEDP VTYKRIAKLL DEKRIEREAY VAQAIERLQH ELAEAHIPAD
VSGRPKHIYS IWRKMRGKEL DFAELYDVRA FRVIVPDIKD CYAVLGIVHH LWQPVPKEFD
DYISRPKPNG YKSLHTVVIG DDGRAFEVQI RTQEMHRFAE YGIAAHWRYK EAGARGYGGQ
FSASDKYDEK IAWLRQLLAW KDDVEVSGDQ AWAQLRETSL DDDHIYVLTP QARVIALPQG
ATPVDFAYHL HSELGHRCRG ARVDGVMVPL NTSLANGQTV EIVAVKEGGP SRDWLNLQLG
YLKSSRARQK VRAWFNSIEQ EENIAHGRAL VEKTLQREGK TSVNLDNLAA KLGFKSPDEL
FSVVGKEEFS LRHVEQALSD APPPEHAPEA PADFEKRSSG ASVAHGASTG VLVVGVDALL
TQLARCCRPA PPDPISGFVT RGKGMSIHRS DCPTFRRMAE RAPERVLQTT WSADVLGGRG
ASVYPVDLMI EASDRQGLLR DISEVFAREK MNVVGVKTQS RRNAAFMQFT VEVSNSAQVQ
RACTLLGEVA GVVRAGRKT
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