Gene Bamb_1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1282 
Symbol 
ID4311680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1402975 
End bp1404684 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content65% 
IMG OID638149091 
Productglutaminyl-tRNA synthetase 
Protein accessionYP_773174 
Protein GI115351335 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00440] glutaminyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCG AACGTAACGA CGCCCCCGCG GCTTCCAACT TCATCCGCAA CATCATCGAC 
GACGACAACC GCACCGGCAA ATGGGGCGGC CGCGTCGAAA CGCGCTTCCC GCCCGAGCCG
AACGGCTATC TGCACATCGG CCATGCGAAG AGCATCTGCC TGAACTTCAG CGTCGCGCGC
GACTACGGCG GCGTGTGCCA CCTGCGCTTC GACGACACGA ACCCGGAAAA GGAAAGCGTC
GAGTACGTCG ACTCGATCGT CGACGCGGTG CGCTGGCTCG GCTTCGACTG GCGCAAGGAT
GCGGTCGATC ATCAGTATTT CGCGAGCGAC TACTACGACA AGCTGTACGA ATTCGCCGAG
CTGCTGATCC AGCGCGGCAA GGCGTACGTC GACAGCCAGA GCGCCGACGA AATGCGCGCG
AACCGCGGCT CGCTGACCGA AGGCGGCAAG CCGTCGCCGT ACCGCGCCCG TTCGCCCGAG
GAAAACCTCG ACCTGTTCCG CCGGATGAAG GCCGGCGAGT TCAAGGAAGG CGAGCACGTG
CTGCGCGCGA AGATCGACAT GGCGTCGCCG AACATGAACA TGCGCGACCC GGTGATCTAC
CGGATCCGCT ACGCGCACCA CTACCGCACC GGCGACGCAT GGTGCGTGTA TCCGATGTAC
GACTACACGC ACTGCATCTC GGATGCGCTC GAGGGCATCA CGCACTCGCT GTGCACGCTC
GAGTTCGAGG ATCACCGCCC GCTGTACGAC TGGGTGCTGA ACGAACTCGC GGATGCCGGC
GTGTTCACGC GGCCGCTGCC GCAACAGATC GAATTCTCGC GCTTGAACCT CACGTACGCG
ATCACCAGCA AGCGCAAGCT GCTGCAGCTC GTCACCGAAG GTCACGTCGA AGGCTGGGAC
GATCCGCGCA TGCCGACGAT CGTCGGGATC CGCCGCCGCG GCTTCACGCC GGAGAGCATC
CACCTGTTCT GCGAGCGGAT CGGCGTGACG AAGGTCGATT CGTGGATCGA CATGAGCGTG
TTCGAAGGCG CGCTGCGCGA CGATCTCGAC GACAAGGCGC CGCGCTCGGT CGCCGTGCTC
GATCCGCTGA AGCTCGTGAT CGACAACTAT CCGGAAGACC TCGAGGAAGC GTGCACGGCT
CCCGTGCATC CGCATCATCC GGAGCGCGGC GTGCGCACGT TCCCGATCTC GCGCGAGCTG
TGGATCGAAC GCGAGGACTT CGTCGAGAAC CCGCCGAAGG GCTATTTCCG CCTGTTCCCG
GGCAACAAGG TGCGCCTGCG CTACGGCTAC GTGATCGAGT GCACGGGCTT CGACAAGGAC
GCCGACGGTA ACGTGACGGC CGTGCACTGC AACTACTTCC CGGACAGCAA GTCGGGCACG
GACGGCGCGA ACACGTACAA GGTCAAGGGC AACATCCACT GGGTCAGCGC GAAGCATGCG
CAGCCGGCCG AAGTGCGGAT CTACGACCGG CTGTTCAAGG AGCCGCACCC GGACGCGGGC
GGCGCGAACT TCCTCGAGGC GCTGAACCCG GATTCGAAGA AGATCACGCA GGCTTACGTC
GAGCCGGGCG CCGGCGATGT CGCGCCGGAA ACGCGCTTGC AGTTCGAGCG TCACGGCTAT
TTCGTTGCCG ACCGCGTCGA TTCGAAACCG GGCAAGCCCG TGTTCAACCG GATCGTCGGG
CTGCGCGACA GCTGGGGCAA GCCGGCGTGA
 
Protein sequence
MSTERNDAPA ASNFIRNIID DDNRTGKWGG RVETRFPPEP NGYLHIGHAK SICLNFSVAR 
DYGGVCHLRF DDTNPEKESV EYVDSIVDAV RWLGFDWRKD AVDHQYFASD YYDKLYEFAE
LLIQRGKAYV DSQSADEMRA NRGSLTEGGK PSPYRARSPE ENLDLFRRMK AGEFKEGEHV
LRAKIDMASP NMNMRDPVIY RIRYAHHYRT GDAWCVYPMY DYTHCISDAL EGITHSLCTL
EFEDHRPLYD WVLNELADAG VFTRPLPQQI EFSRLNLTYA ITSKRKLLQL VTEGHVEGWD
DPRMPTIVGI RRRGFTPESI HLFCERIGVT KVDSWIDMSV FEGALRDDLD DKAPRSVAVL
DPLKLVIDNY PEDLEEACTA PVHPHHPERG VRTFPISREL WIEREDFVEN PPKGYFRLFP
GNKVRLRYGY VIECTGFDKD ADGNVTAVHC NYFPDSKSGT DGANTYKVKG NIHWVSAKHA
QPAEVRIYDR LFKEPHPDAG GANFLEALNP DSKKITQAYV EPGAGDVAPE TRLQFERHGY
FVADRVDSKP GKPVFNRIVG LRDSWGKPA