Gene Bamb_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1235 
Symbol 
ID4309408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1349066 
End bp1350436 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content68% 
IMG OID638149044 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_773127 
Protein GI115351288 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.403806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGTC CGTTGATCAG GCTGTACCTC ATCGTGATCC TGTGCGGCGC CGGATCGATC 
GCGTTCATCC AGTTCTCGTT CGACCGGATC TTCTACGAAC GCGCGGCGCA GGCGCAGCGA
GACTCGCTGA CCACCTACGC GTTCGTGCTG AACGATTATC TCGAACGCCA TCCGGGCGCG
CAGCGCACGC TCGCGCTGCG CGAGCTCGCG AAGCACGGCA AGGAAGGATT CGACTTCGTG
ACGATGGCTG AAGCCCGCGC GCAACTGAGC GGCGCGCCAC TGCGCGACCT CGACGCCGGC
AAGATCGCGA TCGGCTATGA CGGCAAGGAT TACTACATGC CGCTCGCGGA CGGTTCCGTG
CTGCATGCGC GCCCGATCCA GCCCTTCGAC CTCGACATCA AGATCTACGC CTACTTGCTG
CTCGCGCTTG CCGCGCTGTT CGCGGTCGTG CTGTGGATCT CGTATCACTG GCGCGACCTG
CGCAGGCTGC AGGCCGCCGC CCATGCGTTC GGCGCGGGCC GCCTGTCGAC CCGCGTGAAG
CTGTCCGGCC GGTCGAACAT CTACGAGCTG TCGCAGCAGT TCAACGACAT GGCCGAACGG
ATCGAGGCGT CGATCAAGCA GCAGCGCGAG ATGATGCACG GGATCTCGCA TGAGCTGAAG
ACGCCGCTCG CCCGCCTCGA ATTCGGGCTC GCGCTGCTCG CCGAATCCGA CGAGAGCGGC
CGGATGCGCG AACGCCGCGA CGAACTGCGG CGCGACGTGC GCGAACTCGA CGAACTGGTG
ACCGAGCTGC TGACGATCGG GCGGCTCGAA CAAGGCGCCA GCGAGCTCGC GCCGATGGAC
GTCGTCGTCG ATGCGCTGAT CGACAGCGTC GCCGGCAACG TCGCGAACGA CCTCGCCGAT
CGCGGCATCA CGCTCGACGT GTCGACGACC GGCGCACCCG CCACCCACGT GTGCGATCCG
AAACTCGTCG CTCGCGCGCT GCTCAACCTG ATCCGCAACA GCGCGCGCTA TGCGGCGCGC
ACGGTGCTGC TGTCCGCGAC GCACGATGCG TCAGGGGCGC TGGTGCTGAG CGTCGACGAC
GACGGCCCCG GCATTCCGGC CGCCGAGCGC GCGCGCGTGT TCGAACCGTT CCAGCGGCTC
GATTCGAGCC GCGACCGGCA GACGGGCGGG TTCGGTCTCG GGCTCGCGAT CGTGCGGCGC
GTTGCGCTCG TGCACGGCGG CAACGTGCGG CTCGAGGATT CGCCGCTCGG CGGCGCACGC
TTCGTGATTT CGCTGCCGGC GCGGACCTTG CCGGACTTCC GCGGCAACGC GCAGGCGAGT
CCGGCATGCG GCCGGGCCGA TCTCGCCGGC GCGGCTTCAT TGCTCAGCTG A
 
Protein sequence
MLRPLIRLYL IVILCGAGSI AFIQFSFDRI FYERAAQAQR DSLTTYAFVL NDYLERHPGA 
QRTLALRELA KHGKEGFDFV TMAEARAQLS GAPLRDLDAG KIAIGYDGKD YYMPLADGSV
LHARPIQPFD LDIKIYAYLL LALAALFAVV LWISYHWRDL RRLQAAAHAF GAGRLSTRVK
LSGRSNIYEL SQQFNDMAER IEASIKQQRE MMHGISHELK TPLARLEFGL ALLAESDESG
RMRERRDELR RDVRELDELV TELLTIGRLE QGASELAPMD VVVDALIDSV AGNVANDLAD
RGITLDVSTT GAPATHVCDP KLVARALLNL IRNSARYAAR TVLLSATHDA SGALVLSVDD
DGPGIPAAER ARVFEPFQRL DSSRDRQTGG FGLGLAIVRR VALVHGGNVR LEDSPLGGAR
FVISLPARTL PDFRGNAQAS PACGRADLAG AASLLS