Gene Bamb_1204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1204 
Symbol 
ID4309935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1319308 
End bp1320138 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content65% 
IMG OID638149012 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_773096 
Protein GI115351257 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCTCT GGTTTCTGGT ATTCCTGAGC GTCCTGCAGG GCGTTACCGA ACTCTTCCCC 
GTCAGCAGTC TCGGCCACAC GCTGCTCGTG CCGGCGTTGT TCGGCATGCA CATCGACAAG
CATGCGCCGC AGTTGCTGCC GTTCCTCGTC GCGCTGCACC TCGGCACCGC GCTCGCGCTG
CTGTGGTATT TCCGTGCGCG CTGGATCGCG CTGATCAGCG GCTTCTTCGC GCAGCTCGGC
GGCCGCAAGA ACGACGACGG GCACCTGATG TGGGCGCTGA TCATCGGCAC GATCCCGACC
GGGATCGTCG GCCTGCTGCT CGAGAAGCGC CTCGAGCGCG TGTTTCACGA TCTGCGGATC
GTTGCGGTCG CGCTGATCAT CAACGGCGTG CTGCTGTGGG TCGGCGACCG CATTCAGCGC
AGCCGTGCGC ACCAGGCGCC GGAGAAGATG ACGTTCAAGC AGGCGTTCTT CGTCGGCCTC
GCGCAGATCG GCGCGCTGAT TCCGGGATTT TCGCGCAGCG GCCTGACGAT GATCGCCGGC
AATGTAGCCG GGCTGACGGC GGAGAAGGCG GCGGAGTTTT CATTCCTGCT CGGCACGCCG
ATCATTTTTG CCGCGGGCGT GCTCGAGTTG CCGAAGCTCT TTCATGCGCG CGACCAGCTC
ATGGACGCGC TGCTCGGCGG CGTGCTGACG GCGATTGCCG CTTATCTGAG CGTGCGGTTT
CTGATGCGCT ATTTCGAAGG GCGCGGGCGG CTGGCTTCGT TCGGCGTGTA TTGCGTGATC
GCCGGCGTGT TCTTCCTCGG CTGGTTCATG CTGCATCCGC AGCCGGTTTG A
 
Protein sequence
MSLWFLVFLS VLQGVTELFP VSSLGHTLLV PALFGMHIDK HAPQLLPFLV ALHLGTALAL 
LWYFRARWIA LISGFFAQLG GRKNDDGHLM WALIIGTIPT GIVGLLLEKR LERVFHDLRI
VAVALIINGV LLWVGDRIQR SRAHQAPEKM TFKQAFFVGL AQIGALIPGF SRSGLTMIAG
NVAGLTAEKA AEFSFLLGTP IIFAAGVLEL PKLFHARDQL MDALLGGVLT AIAAYLSVRF
LMRYFEGRGR LASFGVYCVI AGVFFLGWFM LHPQPV