| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1199 |
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| Symbol | |
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| ID | 4309930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1313313 |
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| End bp | 1314683 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638149007 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_773091 |
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| Protein GI | 115351252 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.281549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATT CCGCATTACC GCACGCAGTC GGCACCGGAT CGGCCGTCGT CTCGCACCGG
CGCGTCCTCG CGCTCGCGTT CCCGATCGTC CTGGCGAACC TGACCCAGCC GATCCTCGGC
GCGGTGGACA CGGCCGTCGC CGGCCACCTC GACGGCGCGC AGTATCTCGG CGGCGTCGCG
CTCGGCGGAC TGTTCTTCAA TTTCGTGTTC TGGGGCTTCG GCTTCCTGCG CATGGGCACG
ACCGGCCTCG TCGCGCAGGC GCACGGCGCC GGCGACGCGG CCGGCATCCG CCTGAACGTG
CTGCGCGCGC TGATCGTCGC GTTCGCGCTC GGCGCCGCGG TGCTCGCGCT GCAGGTGCCG
CTGCTGTCGT TCGCGCTGTC CGCGCTGGGC GGCAGCGACG CGGTGCGCGC AACTGCGCTG
GCCTACGGCC ACGCGCGGAT CTGGAGCGCA CCGTTCGCGC TCGCGAACTA CGTCGTGCTC
GGCTACCTGC TCGGCGTGCA GCGCGTGCGG CTCGCGCTCG TCGCGCAGGT CTTCATCAAT
GCGGTGAACA TCGGTGCCGT GCTGTTGTAC GTGTACGGCT TCGGCTGGGG CATTGCCGGG
ATCGGTGCGG CGACCGCGAC CGCCGACGCA TGCGGCTTCG CGCTCGGCGC CTGGATGCTA
TGGCAGCTGC GGCCGCGCGG CCTCGCGCCC ATCCCCACGC GTGCGCTGGC GGACCGTGCG
GCGCTCAAGC GGCTGATCGT GCTCAATCGC GACATCTTCC TGCGCACGAT GTGCCTGCTC
GGCGCGTTCG GCTGGTTCGC GCATGTCGGC GCGAAACAGG GCGATGCGAC GCTCGCGGCC
AACGCTTTGC TGCTGAATTT TCAGACATTC ATGGCGTACG GGCTGGACGG CTTCGCGCAT
GCGGCCGAGG CGCTCGTCGG CGCCGCGGCC GGCGCGCGCG ACCGCGCCGG ATTCCGGCAG
GCCGTGCGCG TCACGTTGCT GTGGTCCGCG CTCGGTGCGC TGCTGTTCGC GCTCGTCTAC
TGGGCGGCCG GCGGATGGAT CGTCGCGCGG CTGACCGACC AGGCCGAGAT CCGTGCGGTC
GCGCTGCAAT ACCTGCCATG GGCGGCGATC TCGCCGATCG TGTCCGTGTG GGGGTTCCTG
CTCGACGGCG TGTTCATCGG CGCGACGCAG ACGCAATCGC TGATGCGCGC GATGGTCGCG
TCGTTCGCGA TCTTCATTGC CGCGACGCTG ACCGTCGTCG GCCCGTTCGG CAATCACGGG
CTGTGGTTCG CGCTGCTGTT GTTCATGGTC GCGCGCGGTG CGACGCTCGC ACGCTACCTG
CCGGCGCTCG TGCGGCGGAT CAGCGCCGAC GCGCCCGCGG CCGGCGCCTG A
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| Protein sequence | MSDSALPHAV GTGSAVVSHR RVLALAFPIV LANLTQPILG AVDTAVAGHL DGAQYLGGVA
LGGLFFNFVF WGFGFLRMGT TGLVAQAHGA GDAAGIRLNV LRALIVAFAL GAAVLALQVP
LLSFALSALG GSDAVRATAL AYGHARIWSA PFALANYVVL GYLLGVQRVR LALVAQVFIN
AVNIGAVLLY VYGFGWGIAG IGAATATADA CGFALGAWML WQLRPRGLAP IPTRALADRA
ALKRLIVLNR DIFLRTMCLL GAFGWFAHVG AKQGDATLAA NALLLNFQTF MAYGLDGFAH
AAEALVGAAA GARDRAGFRQ AVRVTLLWSA LGALLFALVY WAAGGWIVAR LTDQAEIRAV
ALQYLPWAAI SPIVSVWGFL LDGVFIGATQ TQSLMRAMVA SFAIFIAATL TVVGPFGNHG
LWFALLLFMV ARGATLARYL PALVRRISAD APAAGA
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