Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1164 |
Symbol | |
ID | 4311169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1271606 |
End bp | 1272388 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638148971 |
Product | hydroxyacylglutathione hydrolase |
Protein accession | YP_773056 |
Protein GI | 115351217 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000229771 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGGCAT TCGAAGACAA CTACATCTGG CTCGTGTCGG ACGGCCGCGA TGCGATCGCC GTCGATCCGG GTGAAGCCGC GCCGGTACGC CGTGTTCTTG CGGAACGCGG CTGGCGGTTG ACCGCTATTT TACTCACGCA CCACCACGCC GACCATGTCG GCGGTGTCGC CGCACTGCGA GATAGCCAAC CGGACGATGC GCCGCTCGTG GTTTACGGCC CCGCAGCCGA GGCGATCGGC GTGGTCACCC GGCCGCTCGC GGGCGGCGAT CGCGTGATGC TCGACGCACC GGCGCTCGCA TTCGACGTGC TCGACGTGCC CGGTCACACG CGCGGCCACA TCGCGTATTT TCAGGCGGCC GGCGTAGGCG CGGCCACGCC GCACGTGTTC TGCGGCGACA CGCTGTTCTC GTGCGGCTGC GGCCGCCTGT TCGAAGGCAC GCCCGCGCAG ATGCTCGCGT CGCTCGACGC GCTCGCGGCG CTGCCCGGCG ACACGCGCGT GCATTGCGCA CACGAATACA CACTGTCGAA CATCCGCTTC GCGCTCGCGT GCGAACCGGG CAATGCGGCG CTCGCCGCGT GGCGCGACGA CGCGCAGGCG CTGCGCGCGC GCGGCGTGCC GACGCTGCCC ACCACGATCG CGCACGAACG TGCGGTCAAC CCGTTCATGC GCGCGGACAG CGCGGCGATC CATGCGACGC TCGAAGCCGA GCTGCACGAA ACGGTGCCGG ATCGTCTGGC GGCATTCACG CTGATGCGCG AGTGGAAAAA TCGTTTCCGA TGA
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Protein sequence | MPAFEDNYIW LVSDGRDAIA VDPGEAAPVR RVLAERGWRL TAILLTHHHA DHVGGVAALR DSQPDDAPLV VYGPAAEAIG VVTRPLAGGD RVMLDAPALA FDVLDVPGHT RGHIAYFQAA GVGAATPHVF CGDTLFSCGC GRLFEGTPAQ MLASLDALAA LPGDTRVHCA HEYTLSNIRF ALACEPGNAA LAAWRDDAQA LRARGVPTLP TTIAHERAVN PFMRADSAAI HATLEAELHE TVPDRLAAFT LMREWKNRFR
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