Gene Bamb_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1163 
Symbol 
ID4311168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1270751 
End bp1271563 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content68% 
IMG OID638148970 
Productmethyltransferase type 11 
Protein accessionYP_773055 
Protein GI115351216 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0143221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGATC CACAAATTAT AGACTGGCCC GCCTGGACCG ACTCGCCGCC CGGCCGCTAC 
GTGCTGGGCT GGGAGCAGGC GCAGCTCGAC CGGATCGTGT CCGACGTGTT CGGGTTTCAC
GCGCTCCAGC TCGGCCTGCC GCAGCTCGAC GCGCTGCGCG AGAACCGCAT GCCGTATCGC
GGCCTCGTGC TCGATCCGGC GAGCGGCGCG AGCGCGCCCT ACCAGTATCC ATGGGCGCGC
GAGGCGCGCG GGCCCGAACA TGCGCCGGTC GATCGCAGCA CGACGTGGTG CGACCTGCTC
GACCTGCCGT TCGAGTCGCA GAGCGTCGAC CTGATCGTGA TGCCGCACAC GCTCGAATTC
ACGTCCGACC CTCACCGCTT GCTGCGCGAG GCCGAACGCG TGCTGATGCC GGAAGGCCAG
CTCGTGATCA CCGGCTTCAA TTCGCTGAGC CTGTGGGGCA TGCGGCAATC GTTCGGGCGC
ATGGCGAACC GCCCGTTCGT GCCGGCCGCG CGCGATCAGA TCGCGTTCAT CCGGCTCAAG
GACTGGATCA AGCTGCTCGG CTTCGATCTC GAGCGCGGCC GTTTCGGCTG CTACCGGCCG
CCGCTCGTCA CCGACAAATG GCTTGCCCGC TATGGCTTCA TGGAAGCCGC CGGCGACCGC
TGGTGGCCGA TCTTCGGCGC GGTCTACATG GTCACGGCCG TCAAGCGCGT GCGCGGCATG
CGCCTCGTCG GCCAGATCAA GATGAAAAAG CCGGTGCTCG CGCCGGGCCT CACGCCGGCG
GCCACCCCGA CCACCCATCA AGAACACTCA TGA
 
Protein sequence
MSDPQIIDWP AWTDSPPGRY VLGWEQAQLD RIVSDVFGFH ALQLGLPQLD ALRENRMPYR 
GLVLDPASGA SAPYQYPWAR EARGPEHAPV DRSTTWCDLL DLPFESQSVD LIVMPHTLEF
TSDPHRLLRE AERVLMPEGQ LVITGFNSLS LWGMRQSFGR MANRPFVPAA RDQIAFIRLK
DWIKLLGFDL ERGRFGCYRP PLVTDKWLAR YGFMEAAGDR WWPIFGAVYM VTAVKRVRGM
RLVGQIKMKK PVLAPGLTPA ATPTTHQEHS