| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1133 |
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| Symbol | |
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| ID | 4308747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1243719 |
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| End bp | 1244741 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638148940 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_773025 |
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| Protein GI | 115351186 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCT ATTTCCACCC CGAACAGTTG CTGCACCATC CGCGGACCTA CCTGTCGCGC
GGCAGGATGC GCGAGCCACA GGAAGTGCCC GAGCGCGCGG CGCGGCTGGT CGCGGCCGTG
CGTTCGCTCG ACTTCGACGT GCGCGAGCCG GCCGACCGCG GCACCGCGCC GATCGCGGCC
GTGCACGACA TGAACTACCT GCGTTTTCTG GAGGAAGCGC ACCGCGACTG GAAACGGATG
CCCGACGACT GGGGCGACGA AGTGATGTCG AACGTGTTCG TGCGCGATCC GAATCCGCTG
CGCGGCGTGC TCGCGAAAGC CGCGCGCTAT CTCGCAGACG GCAGCTGTCC GGTCGGCGCG
AACACGTGGT GCGCCGCGTA CTGGTCCGCA CAGAGCGCGC TCGCGGCCGC GGCGGACGTC
AACGACGGCG CGCGCGACGC GTACGCGCTG TGCCGCCCGC CCGGCCATCA CGCGCGCCGC
GATGCGGCCG GCGGCTTCTG TTACCTGAAC AACGCGGCGA TCGCCGCGCA GGCGCTGCTC
GGCCGCCATT GGCGCGTCGC GATCCTCGAC ACCGACATGC ATCACGGGCA GGGCGTGCAG
GAAATCTTCT ACGGCCGCGA CGACGTGCTG TACGTGTCGA TCCACGGCGA CCCGACCAAT
TTCTATCCGG TCGTCGCCGG CTACGAGGAA GAGACGGGCG CGGGGCCCGG CGACGGCTAC
AACCTGAACC TGCCGATGCC GCACGGCGCG CCCGAGTCGA CCTTCTTCGA GCGGCTCGAC
GACGCGCTGC GCGCGCTCGC GCGGTTCCAG CCGGAGGCGC TCGTGCTCGC GCTCGGCTTC
GACATCTACA AGGACGACCC GCAATCGCAG GTGGCCGTCA CGACCGACGG GTTCGGCCGG
CTCGGCGGCG CGATCGGCGC GCTCGGCTTG CCGACGGTGA TCGTGCAGGA GGGCGGCTAT
CACCTCGAGA GCCTCGATGC GAATGCGCGT GCATTCTTCG GCGGGTTCGC CGCCGCGCGC
TGA
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| Protein sequence | MKTYFHPEQL LHHPRTYLSR GRMREPQEVP ERAARLVAAV RSLDFDVREP ADRGTAPIAA
VHDMNYLRFL EEAHRDWKRM PDDWGDEVMS NVFVRDPNPL RGVLAKAARY LADGSCPVGA
NTWCAAYWSA QSALAAAADV NDGARDAYAL CRPPGHHARR DAAGGFCYLN NAAIAAQALL
GRHWRVAILD TDMHHGQGVQ EIFYGRDDVL YVSIHGDPTN FYPVVAGYEE ETGAGPGDGY
NLNLPMPHGA PESTFFERLD DALRALARFQ PEALVLALGF DIYKDDPQSQ VAVTTDGFGR
LGGAIGALGL PTVIVQEGGY HLESLDANAR AFFGGFAAAR
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