Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1101 |
Symbol | |
ID | 4309676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1209585 |
End bp | 1210865 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638148909 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_772994 |
Protein GI | 115351155 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGCCT CCCGCGAGCT CTCGCTCGAA TCCCTGCTCG AACGCCTCAC GCCGACGCCC AGCGGCTGGA TCGCCACGTA TCGCGACACG ACGCTGCGCA GCGTGTTCCA ACCCGTGCTG TCGATCACGC ACAAGCGCGT GGTCGGCTAC GAAGCGCTGC TGCGCGTCGT GGACGCGAAC GGCACGCTGG TGTCGCCGGT CGCACTGTTC GACAAGACGC GCGCGGCCGC CGACGCGTTG CTGCTCGACC GGCTCGCGCG CTGCCTGCAT ACGGCCAACT TCGTCGCGCA AGGCATCGGC GACGGCTGGC TGTTCCTGAA CGTGACGCCG CGCGTGCTCG ATTCGGGCCT CGTGCAGCGC GAATTCGTCG AGGCGCTGTG CCGGCATTTC GCACTGCCGC CGAACCGCAT CGTGCTGGAA GTCGTCGAGC AGCCGTCGCG CGACGAGGCC GCGCTCGCCC GCACGATCGA CATGATCCAG CATCGCGACT TCCTGATCGC GATCGACGAT TTCGGCACCG GATTCTCGAA TTTCGACCGC GTGTGGCGCG CACGGCCGGA TATCGTCAAG CTCGACCGCT CGCTCGTCGA ACGCGCGACC GGCTCGGGCG AGGATCGCCG CATCATGCAT CACCTGGTAT CGATGCTCCA CCAGGCCGGC GCGATGGTGC TCGCCGAGGG TGTCGAAAAC GACGACGCAC TGCAGGCGCT GATGGACGCC GATATCGATT TCGTCCAGGG CTTCCAGTTC GGCCAGCCCG ATGGATCGAT CGCACATGCG AGCGCCGCGG CGCCCGCGAT GCTCGATGCC GCGTGGCAGC GTTTCATCGC GCAGCGGCAT ACGCCGGGGA GCGCCGAGCA GCCGGGCTTC GACGCGATCG AGCGGCTCGT GCTCGCCGGC GCGGCCGCGT TTTCCGCAAG CGGCGACCTG AACGACGCCG CCCAGCGCGT CTTCACGGTG CCGGCCGCGC GCCGCGTGTT CGTCACGGAC GAGATCGGCG AACAGTTCCT GCCGTCGATC GGCGCCCCCC CCGAGGACGG CCAGGCGGGC GGCACCCGGC TCTCGCCGCT GTTTCCGGAA ACGCACAGCA ACTGGTCGCG ACGCCCGTAC TTCCAGCGCG CAATCGCTGC GCCGGGACGC GTCGCGTTGA TGGGCCCGCA CTTCTCGCTG ACCGAAGGCC GCGACTGCTA TACCGCGGCG GTCGCGATTC GCGCGCAAAG CCGCCTCGTC GTGTTCTGCG TCGACTTCGT GCTGGACAGC GCGGGCACCG TGATGCGGTA G
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Protein sequence | MKASRELSLE SLLERLTPTP SGWIATYRDT TLRSVFQPVL SITHKRVVGY EALLRVVDAN GTLVSPVALF DKTRAAADAL LLDRLARCLH TANFVAQGIG DGWLFLNVTP RVLDSGLVQR EFVEALCRHF ALPPNRIVLE VVEQPSRDEA ALARTIDMIQ HRDFLIAIDD FGTGFSNFDR VWRARPDIVK LDRSLVERAT GSGEDRRIMH HLVSMLHQAG AMVLAEGVEN DDALQALMDA DIDFVQGFQF GQPDGSIAHA SAAAPAMLDA AWQRFIAQRH TPGSAEQPGF DAIERLVLAG AAAFSASGDL NDAAQRVFTV PAARRVFVTD EIGEQFLPSI GAPPEDGQAG GTRLSPLFPE THSNWSRRPY FQRAIAAPGR VALMGPHFSL TEGRDCYTAA VAIRAQSRLV VFCVDFVLDS AGTVMR
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