Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1041 |
Symbol | |
ID | 4308638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1130128 |
End bp | 1131480 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638148849 |
Product | mandelate racemase/muconate lactonizing protein |
Protein accession | YP_772934 |
Protein GI | 115351095 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCCG TCACTGCCTC GCCTTCCCAC GACACGCCGC GCATCGTCGA GCTGCAAGCC ATTCCGGTCG CCGGCCACGA CAGCATGCTG CTCAACCTGA GCGGCGCGCA CGGTCCGTTC TTCACCCGCA ACCTCGTGAT CCTGAAGGAC AGCGCGGGCC GGACCGGCGT CGGCGAAGTG CCGGGCGGCG AAAGCATCCG CCGCACGCTC GAGGATGCGC GCGCGCTCGT CGTCGGCCAG CCGGTCGGCA ACTACCACGC GGTGCTCAAC GACGTGCGGC GCACCTTTGC CGATCGCGAC GTGAGCGGCC GCGGCCTGCA GACGTTCGAC CTGCGCACCA CGATCCACGC GGTCACCGCG CTCGAAGCCG CGCTGCTCGA CCTGCTCGGC CAGCATCTCG GCGTGCCCGT GGCCGCGCTG CTCGGCGAAG GGCAGCAGCG CGAGCGCGTC GAGATGCTCG GCTACCTGTT CTACGTCGGC GACCGCGGCA AGACCGCGCT GCCCTATCGC GACGGCCGCG GCGCGACCGA CGAGTGGACC CGCGTGCGCG ACGAGGCCGC GCTGACGCCC GAGGCGGTCG TGCGCCTCGC CGAAGCCGCG CACGCGCGCT ACGGTTTCAA CGACTTCAAG CTGAAGGGCG GCGTGTTCGA AGGCGCGCGC GAGATCGAAG CCGTGACGGC GCTGGCCGAG CGCTTCCCCG AAGCGCGCGT GACGCTCGAT CCGAACGGCG CGTGGTCGCT CGACGAGGCC GTGCGGCTGT GCCGAGACCT GCACCACGTG CTCGCGTATG CGGAAGATCC GTGCGGCGCG GAGAACGGCT ACTCGGGCCG CGAGGTGATG GCCGAATTCC GCCGCTCGAC CGGGCTGCCG ACGGCCACCA ACATGATCGC GACCGACTGG CGCCAGATGG GCCACGCGGT GCAGCTGCAC GCCGTCGACA TCCCGCTCGC CGACCCGCAC TTCTGGACGA TGCAGGGCTC GGTGCGCGTC GCGCAGATGT GCCGCGACTG GGGCCTCACG TGGGGTTCGC ATTCGAACAA CCACTTCGAC GTGTCGCTCG CGATGTTCAC GCACGTCGCG GCCGCGGCGC CCGGGCAAGT CACCGCGATC GACACGCACT GGATCTGGCA GGATGGCGAA CGGCTCACTC GCGAGCCGCT GAAGATCGAG AACGGGCTCG TTGAAGTGCC GAAGCGGCCG GGCCTCGGCA TCGACATCGA CATGGATGCG GTCGCGGTCG CGCACGAGCT GTACAAGCAA CACGGGCTCG GCGCGCGCGA CGATGCGGCG GCGATGCAGT ATCTGATTCC GGGGTGGACG TTCAACAACA AGCGCCCCTG CCTCGTGCGC TGA
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Protein sequence | MNAVTASPSH DTPRIVELQA IPVAGHDSML LNLSGAHGPF FTRNLVILKD SAGRTGVGEV PGGESIRRTL EDARALVVGQ PVGNYHAVLN DVRRTFADRD VSGRGLQTFD LRTTIHAVTA LEAALLDLLG QHLGVPVAAL LGEGQQRERV EMLGYLFYVG DRGKTALPYR DGRGATDEWT RVRDEAALTP EAVVRLAEAA HARYGFNDFK LKGGVFEGAR EIEAVTALAE RFPEARVTLD PNGAWSLDEA VRLCRDLHHV LAYAEDPCGA ENGYSGREVM AEFRRSTGLP TATNMIATDW RQMGHAVQLH AVDIPLADPH FWTMQGSVRV AQMCRDWGLT WGSHSNNHFD VSLAMFTHVA AAAPGQVTAI DTHWIWQDGE RLTREPLKIE NGLVEVPKRP GLGIDIDMDA VAVAHELYKQ HGLGARDDAA AMQYLIPGWT FNNKRPCLVR
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