Gene Bamb_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0998 
Symbol 
ID4311502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1087510 
End bp1088442 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content69% 
IMG OID638148802 
Productmalonyl CoA-acyl carrier protein transacylase 
Protein accessionYP_772891 
Protein GI115351052 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTG CATTCGTTTT TCCGGGGCAG GGCTCGCAGT CGGTCGGCAT GCTCAACGCA 
TTCGCCGATC TGGCCGTCGT GCGCGAGACG CTCCAGGAAG CATCCGATGC ACTCAATCAG
GATATCGGCA AGCTGATCGC CGAAGGTCCG GCCGAAGAGC TGAATCTGAC CACCAACACG
CAGCCGGTGA TGCTGACGGC CGCCTACGCG TGCTATCGCG CGTGGCAGCA GGCCGGCGGC
CCGGCGCCGT CGATCGTCGC GGGCCACAGC CTCGGCGAAT ACACGGCGCT CGTCGCGGCA
GGCGCGATCG CGTTCAAGGA CGCGGTGCCG CTCGTGCGCT TCCGTGCGCA GGCGATGCAG
ACGGCCGTGC CGGTCGGCCA GGGCGGCATG GCCGCGATCC TGGGCCTCGA TGACGATACG
GTGCGCGCGG TGTGCGCCGA AGCCGCGGCA GCGGGCGTCG TCGAAGCCGT GAACTTCAAC
GCGCCGGCGC AGGTCGTGAT CGCGGGCGCG AAGGCGGCCG TCGAGAAGGC GTGCGAAATC
GCGAAGGCGA AGGGCGCGAA GCGCGCGCTG CCGCTGCCGG TGTCGGCGCC GTTCCATTCG
TCGTTGCTCA AGCCGGCGTC GGACCAGTTG CGCGACTATC TCGCGAGCGT CGACGTGAAG
GCGCCGCAGA TTCCGGTCGT CAACAACATC GACGTCGCGG TGGTCAGCGA TCCGGCCGCG
ATCAAGGACG CGCTGGTGCG CCAGGCCGCG GGCCCCGTGC GCTGGGTCGA ATGCGTGCAG
CACATCGCGG GCACGGGCGT CACGCACGTG ATCGAATGCG GTCCGGGCAA GGTGCTGGCG
GGCCTCACGA AGCGCATCGA CGGCAACCTG GTCGGCGCCT CGGTGTTCGA TCCGGCTTCG
CTCGACGAAG CACTGAAGCT GGCGACCGCC TGA
 
Protein sequence
MKFAFVFPGQ GSQSVGMLNA FADLAVVRET LQEASDALNQ DIGKLIAEGP AEELNLTTNT 
QPVMLTAAYA CYRAWQQAGG PAPSIVAGHS LGEYTALVAA GAIAFKDAVP LVRFRAQAMQ
TAVPVGQGGM AAILGLDDDT VRAVCAEAAA AGVVEAVNFN APAQVVIAGA KAAVEKACEI
AKAKGAKRAL PLPVSAPFHS SLLKPASDQL RDYLASVDVK APQIPVVNNI DVAVVSDPAA
IKDALVRQAA GPVRWVECVQ HIAGTGVTHV IECGPGKVLA GLTKRIDGNL VGASVFDPAS
LDEALKLATA