| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0947 |
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| Symbol | trmD |
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| ID | 4308685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1038737 |
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| End bp | 1039531 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638148749 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_772840 |
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| Protein GI | 115351001 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.106358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAGG TTACGGAGAG CGCGGTGCAG TTCGACGTCG TCACGCTCTT TCCTGAAATG
TTCCGCGCGC TGACCGACTG GGGTATCACC AGCCGGGCCG TGAAGCAGGA GCGCTTCGGG
TTGCGCACCT GGAACCCGCG TGATTTCACG ACGGACAACT ACCGCACGGT CGACGATCGT
CCGTATGGTG GTGGTCCGGG CATGGTGATG CTGGCCAAGC CGCTCGAGGC CGCGATCGGC
GCTGCGAAAG CAGCGCAGGC GGAGCAGGGC GTCGCGAGCA CGCGTGTGGT GATGATGTCG
CCGCAAGGTG CGCCGTTCAC GCACGAACGT GCGGTGCGGA TGGCGCAGGA GCCTGGTGTC
ATCGTGCTGT GCGGCCGCTA CGAGGCGATC GATCAGCGTC TGCTCGACCG TTGTGTAGAC
GAGGAAATCA GCCTCGGCGA TTTCGTTCTG TCCGGTGGCG AACTGCCGGC GATGGCGATG
ATGGATGCCG TCGTGCGCCT GCTGCCCGGC GTGCTGAACG ATGCGCAGTC AGCCGTGCAG
GACAGCTTCG TCGACGGGCT GCTCGATTGT CCGCATTACA CGCGCCCCGA GGAATACGAG
GGAATGCGCG TGCCTGACGT GCTGCTCGGC GGGCATCATG CCGAGATCGA GCGGTGGCGC
CGCCAGGAAG CATTGAAGAA TACGTTGCGG AAGCGGCCGG ATCTGATCGT CCGGGCGCGC
CGCGAGAAGT TGTTGAGCCG GGCCGACGAG GCGTGGCTTG CGAACCTCGC ACGCGAAGCG
AAGAACGCCT CCTGA
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| Protein sequence | MNQVTESAVQ FDVVTLFPEM FRALTDWGIT SRAVKQERFG LRTWNPRDFT TDNYRTVDDR
PYGGGPGMVM LAKPLEAAIG AAKAAQAEQG VASTRVVMMS PQGAPFTHER AVRMAQEPGV
IVLCGRYEAI DQRLLDRCVD EEISLGDFVL SGGELPAMAM MDAVVRLLPG VLNDAQSAVQ
DSFVDGLLDC PHYTRPEEYE GMRVPDVLLG GHHAEIERWR RQEALKNTLR KRPDLIVRAR
REKLLSRADE AWLANLAREA KNAS
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