| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0921 |
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| Symbol | |
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| ID | 4310388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 1013413 |
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| End bp | 1014717 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638148723 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_772814 |
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| Protein GI | 115350975 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.206202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTATC TCGATCTCGG CCCGTATTCC AGCGCTTCGG GCACCGTGCG GCTGCCCGGC
TCGAAGAGCA TCTCGAACCG CGTGCTGCTG CTCGCGGCGC TTGCCGAAGG CGACACGACG
ATCACCAACC TGCTGGATTC CGACGACACG CGCGTAATGC TCGATGCGCT CGGCAAGCTC
GGCGTGAAGC TCGCGCGCGA CGGCGACACC TGTGTCGTCA CCGGCACGCG CGGCGCGTTC
ACCGCGAAGA CTGCCGACCT GTTCCTCGGC AATGCGGGCA CGGCAGTGCG GCCGTTGACC
GCGGCGCTCG CGATCAACGG CGGCGACTAT CGCGTGCACG GCGTGCCGCG CATGCACGAG
CGGCCGATCG GCGACCTCGT CGACGGCCTG CGCCAGATCG GCGCGCAGAT CGACTACGAG
CAGAACGAAG GCTTTCCGCC GCTGCGGATC AAGCCCGGGA CGATCTCGGT CGACGCGCCG
ATCCGCGTGC GCGGCGACGT GTCGAGCCAG TTCCTCACCG CGCTGCTGAT GACGCTGCCG
CTCGTGAAGG CGAAGGATGG CAGGACCGTC GTCGAAATCG ACGGCGAGCT GATCTCGAAG
CCGTACATCG ACATCACGAT CCGGCTGATG GAGCGCTTCG GCGTGACCGT CGAGCGCGAC
GGCTGGCAGC GCTTCGTCGT GCCGGCCGGC GTCCGCTACC GGTCGCCGGG ACGCATCATG
GTCGAGGGCG ATGCGTCGTC GGCCTCGTAC TTCCTCGCGG CCGGCGCGCT CGGCGGTGGT
CCGCTGCGTG TCGAGGGCGT GGGGCGCGCA AGCATCCAGG GCGACGTCGG CTTCGCCAAC
GCGCTGATGC AGATGGGGGC GAACGTGTCG ATGGGCGACG ACTGGATCGA GGTGCGCGGC
ATCGGCCACG ACCACGGCAA GCTCGACCCG ATCGACATGG ACTTCAACCT CATTCCCGAC
GCGGCGATGA CCATCGCGGT CGCGGCGCTG TTCGCGAGCG GCACGAGCAC GCTGCGCAAT
ATCGCGAGCT GGCGCGTGAA GGAAACCGAC CGCATCGCGG CGATGGCGAC CGAGCTGCGC
AAGGTCGGCG CGATCGTCGA GGAAGGTGCC GACTATCTGG TCGTCACGCC GCCGCAACGG
CTCACGCCGA ATGCCGCGAT CGATACGTAC GACGATCACC GCATGGCGAT GTGCTTCTCG
CTCGTCAGCC TGGGCGGCGT GCCCGTGCGG ATCAACGATC CGAAGTGCGT CGGCAAGACG
TTCCCCGACT ATTTCAACCG CTTCGCCGCG CTCGCCAAAG CCTGA
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| Protein sequence | MDYLDLGPYS SASGTVRLPG SKSISNRVLL LAALAEGDTT ITNLLDSDDT RVMLDALGKL
GVKLARDGDT CVVTGTRGAF TAKTADLFLG NAGTAVRPLT AALAINGGDY RVHGVPRMHE
RPIGDLVDGL RQIGAQIDYE QNEGFPPLRI KPGTISVDAP IRVRGDVSSQ FLTALLMTLP
LVKAKDGRTV VEIDGELISK PYIDITIRLM ERFGVTVERD GWQRFVVPAG VRYRSPGRIM
VEGDASSASY FLAAGALGGG PLRVEGVGRA SIQGDVGFAN ALMQMGANVS MGDDWIEVRG
IGHDHGKLDP IDMDFNLIPD AAMTIAVAAL FASGTSTLRN IASWRVKETD RIAAMATELR
KVGAIVEEGA DYLVVTPPQR LTPNAAIDTY DDHRMAMCFS LVSLGGVPVR INDPKCVGKT
FPDYFNRFAA LAKA
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