| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0895 |
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| Symbol | |
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| ID | 4308825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 984083 |
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| End bp | 987034 |
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| Gene Length | 2952 bp |
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| Protein Length | 983 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638148697 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_772788 |
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| Protein GI | 115350949 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.99873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCTCG ACACGAACAA CGTCCGCCAA GGCGGCTGCG GCTCAGGCCA ATGCGCGTGC
AAGAGCGCCG CCCAGGCGCG CGCCTTCGAT CCGTTCGACG ACACCGACTA CGGCACGCCG
CAACGGCATG CCGATACCGA CGTCACGCTC GAAATCGACG GCCAGCCGGT GACGGTGCCG
GCAGGCACGT CGGTGATGCG CGCCGCGATC GAAGCCGGCG TCAATGTGCC CAAGCTCTGC
GCGACCGATT CGCTCGAGCC GTTCGGCTCG TGCCGTCTGT GCCTCGTCGA AATCGAAGGC
CGGCGCGGCT ATCCGGCATC GTGCACGACG CCCGCCGAAG CCGGGATGAA GGTGCGTACG
CAGTCGGACC GGCTGCAGTC GCTGCGCCGC AACGTGATGG AGCTGTACAT CTCCGATCAC
CCGCTCGACT GCCTCACCTG CCCTGCCAAC GGCGACTGCG AGCTGCAGGA CATGGCGGGT
GTCGTCGGCT TGCGCGAAGT GCGCTACGGC TTCGACGGCG CAAATCACCT GCGCGAGCAG
AAGGACGAGT CGAATCCGTA CTTCACGTAC GATCCGTCGA AGTGCATCGT CTGCAACCGC
TGCGTGCGCG CGTGCGAGGA AACCCAAGGC ACGTTCGCGC TGACGATCGC CGCGCGCGGC
TTCGAATCGC GCGTCGCCGC CGGCGAAAGC GAATCGTTCA TGGACTCGGA ATGCGTATCG
TGCGGCGCGT GCGTCGCCGC CTGCCCGACC GCCACGCTGC AGGAAAAATC CGTTGTCCGG
CTCGGCCAGG CCGAGCACTC GGTCGTCACG ACCTGCGCGT ACTGCGGCGT CGGCTGCTCG
TTCAAGGCCG AGATGAAGGG CACGCAGGTC GTGCGCATGA CGCCGCACAA GAACGGCCTC
GCGAACGAAG GCCACGCGTG CGTGAAGGGA CGCTTCGCGT GGGGCTACGC GACCCACAAG
GATCGCATCA CGAAGCCGAT GATCCGCGAG AAGATCACCG ACCCGTGGCG CGAAGTCAGC
TGGGAAGAGG CGCTCACCTA CGCGGCGACG CAATTCCGCA AGCTGCAGCA GAAGTACGGC
CGCGATTCGA TCGGCGGCAT CACGTCGTCG CGCTGCACGA ACGAGGAAAC CTACCTCGTG
CAGAAGCTCG TGCGCGCCGC ATTCGGCAAC AACAACGTCG ACACCTGTGC GCGCGTGTGC
CATTCGCCGA CCGGCTATGG CCTGAAGACG ACGCTCGGCG AATCGGCCGG CACGCAGACC
TTCGCGTCGG TCGACCACGC CGACGTGATC GTCGTGATGG GTGCGAACCC GACCGACGGC
CATCCGGTGT TCGGCTCGCG CCTGAAGCGG CGCATCCGCG AAGGCGCGAA GCTGATCGTG
ATCGATCCGC GCCGCATCGA CGTGGTCGAC GGCCCGCACG TGAAGGCCGC GCACCACCTG
CAGCTGCGCC CTGGCACCAA CGTCGCGATC GTCAACGCGC TCGCGCACGT GATCGTCACC
GAAGGGCTCG TCGCCGACGC GTTCGTCGCC GAGCGCTGCG AAGCGCGCGC ATTCGAGCAA
TGGCGCGACT TCGTGTCGCG TGCCGAGAAC TCGCCCGAAG CGACCGCCGA TGTGACGGGC
GTGCCGGCCG AGGTGGTGCG CGAAGCCGCG CGCCTCTATG CGACCGGCGG CAACGCCGCG
ATCTACTACG GCCTCGGCGT GACCGAACAC GCGCAAGGCT CGACGACGGT GATGGGCATC
GCGAACCTCG CGATGGCGAC CGGCAACATC GGCCGCGAAG GCGTCGGCGT CAATCCGCTG
CGCGGCCAGA ACAACGTGCA GGGCTCGTGC GACATGGGCT CGTTCCCGCA TGAGCTGCCC
GGCTACCGCC ACATCGGCGA CGACAGCGTG CGCGCGCTGT TCGAACACGC ATGGTCGGCC
ACGCTGCAAC CGGAACCGGG GCTGCGCATC CCGAACATGT TCGACGCGGC GCTCGACGGC
AGCTTCAAGG GGCTTTACTG CCAGGGCGAG GACATCGTCC AGTCGGACCC GAACACGCAG
CACGTCGCCG CCGCGCTGTC GTCGATGGAA TGCGTCGTCG TGCAGGACAT CTTCCTGAAC
GAGACCGCGA AATACGCGCA CGTGCTGCTG CCGGGCTCGA CGTTCCTCGA GAAGGACGGC
ACGTTCACGA ACGCGGAGCG CCGCATCTCG CGCGTGCGCA AGGTGATGCC GCCGCTCGCG
GGCTACGCGG ACTGGGAAGT GACGCTGCTG CTGTCGCAGG CGCTCGGCTA CGACATGCAC
TACACGCATC CGTCGGAAAT CATGGACGAG ATCGCACGGC TCACGCCGAC CTTCTCGGGC
GTGTCGTACG CGAAGCTCGA CGCGCTCGGC AGTATCCAGT GGCCTTGCAA CGAACAGGCA
CCGGACGGCA CGCCGACGAT GCACATCGAC GCGTTCGTGC GCGGCAAGGG CCGCTTCGTG
ATCACGCAGT TCATTCCGAC GCCGGAAAAG GTCACGCAGC GCTATCCGCT GATCCTGACC
ACGGGCCGCA TCCTGTCGCA ATACAACGTC GGTGCGCAGA CGCGCCGGAC CGAGAACGTC
CAGTGGCATG AAGAGGACCG CCTCGAGATC CACCCGCATG ACGCGGAGGA TCGCGGGATC
CGGACCGGCG ACTGGGTCGG CATCGAATCG CGTGCGGGCC AGACGGTGTT GCGCGCGCTC
GTGTCCGATC GCATGCAGCC GGGTGTGGTG TACACGACGT TCCACTTCCC CGAATCGGGC
GCGAACGTGA TCACGACGGA CAGCTCCGAC TGGGCGACGA ACTGCCCGGA ATACAAGGTC
ACGGCCGTGC AGGTGATGCC GGTCGCGCAG CCGTCCGACT GGCAGCGTGC GTACGCGCGC
TTCAACTCGG AGCAGCTCGA CCTGCTCGAG CGCCGCGCGG CCGCGCCGGC CGCCGTGACG
ACGGGCAAGT GA
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| Protein sequence | MSLDTNNVRQ GGCGSGQCAC KSAAQARAFD PFDDTDYGTP QRHADTDVTL EIDGQPVTVP
AGTSVMRAAI EAGVNVPKLC ATDSLEPFGS CRLCLVEIEG RRGYPASCTT PAEAGMKVRT
QSDRLQSLRR NVMELYISDH PLDCLTCPAN GDCELQDMAG VVGLREVRYG FDGANHLREQ
KDESNPYFTY DPSKCIVCNR CVRACEETQG TFALTIAARG FESRVAAGES ESFMDSECVS
CGACVAACPT ATLQEKSVVR LGQAEHSVVT TCAYCGVGCS FKAEMKGTQV VRMTPHKNGL
ANEGHACVKG RFAWGYATHK DRITKPMIRE KITDPWREVS WEEALTYAAT QFRKLQQKYG
RDSIGGITSS RCTNEETYLV QKLVRAAFGN NNVDTCARVC HSPTGYGLKT TLGESAGTQT
FASVDHADVI VVMGANPTDG HPVFGSRLKR RIREGAKLIV IDPRRIDVVD GPHVKAAHHL
QLRPGTNVAI VNALAHVIVT EGLVADAFVA ERCEARAFEQ WRDFVSRAEN SPEATADVTG
VPAEVVREAA RLYATGGNAA IYYGLGVTEH AQGSTTVMGI ANLAMATGNI GREGVGVNPL
RGQNNVQGSC DMGSFPHELP GYRHIGDDSV RALFEHAWSA TLQPEPGLRI PNMFDAALDG
SFKGLYCQGE DIVQSDPNTQ HVAAALSSME CVVVQDIFLN ETAKYAHVLL PGSTFLEKDG
TFTNAERRIS RVRKVMPPLA GYADWEVTLL LSQALGYDMH YTHPSEIMDE IARLTPTFSG
VSYAKLDALG SIQWPCNEQA PDGTPTMHID AFVRGKGRFV ITQFIPTPEK VTQRYPLILT
TGRILSQYNV GAQTRRTENV QWHEEDRLEI HPHDAEDRGI RTGDWVGIES RAGQTVLRAL
VSDRMQPGVV YTTFHFPESG ANVITTDSSD WATNCPEYKV TAVQVMPVAQ PSDWQRAYAR
FNSEQLDLLE RRAAAPAAVT TGK
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