Gene Bamb_0881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0881 
Symbol 
ID4308811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp968099 
End bp969415 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content70% 
IMG OID638148683 
Productguanine deaminase 
Protein accessionYP_772774 
Protein GI115350935 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID[TIGR02967] guanine deaminase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.821524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAA CCGCTTTCCG TTCCCAGCTG CTGACCTTCA ACGGCGACCC GGCGCAGTCG 
AGCCAGGCCG CGAACCACGA GACCGACGGC CTGCTGATCG TCGACGACGG CAAGGTCGTC
GCGGCCGGCC CGTATGCGCG GCTCGCCCCG ACGCTCGCGC GCGATGCGGT CGTCCACGAC
CTGCGCGACA AGCTGATCGT GCCCGGCTTC ATCGACACGC ACATCCACTA TCCGCAGACG
GACATGATCG CGTCACCGGC ACCCGGCCTG CTGCCGTGGC TCGACAAGTA CACGTTCCCG
ACCGAGCGCA AGTTCGGCGA TCCTGAGCAT GCGCGCGAGG TCGCCGACTT CTTCGTCGAC
GAACTGCTCG CGTGCGGCAC GACGAGCGCG CTCGTCTACT GCACCGTGCA CAAGCAGTCG
GCCGACGCGC TGTTCGCGGC GAGCGCTGCC CGCGACGTGC GGATGATCGC GGGCAAGGTG
CTGATGGACC GCAACTGCCC CGAGTTCCTG CGCGACACCG CGCAATCGGG CTATGACGAC
AGCGCCGAGC TGATCGGCCG CTGGCACGGC AACGGCCGCC AGCTGTACGC GCTCACGCCG
CGCTTCGCGC CGACGTCCAC CGAGGCGCAG CTCGAGGCGT GCAGCGAACT GGCGCGCCGC
CATCCGGACG TGTTCGTGCA GAGCCATGTC GCAGAAAACG TCGATGAAGT GAAATGGGTC
GCGGAGCTGT TCCCCGGCCA CCGCAGCTAT CTCGACATCT ACGATCGCTA CGGGCTGCTG
CGTCCGCGCG CGGTGTACGG CCACTGCATC CACCTCGACG ACGAGGACCG CCGCCGGATG
GCCCAGACGC GCACCGTCGT CGCGCACTGC CCGACGTCGA ACTTCTTTCT CGGCAGCGGA
CTGTTCGACT TCGACAAGGC CGGCGAATAC GGCGTGCCGG TCACGCTCGC GACCGACGTC
GGCGGCGGTA CGTCGTTCTC GATGCTGCAG ACCATGAACG AGGCGCACAA GGTCGCGCGG
CTGTCGGGCC ACCACCTGAG CGCGACGCGG ATGTTCTGGC TCGCGACGGC CGGCGCCGCG
CACGCGCTCG ATCTCGCCGA CACGGTCGGC ACGCTCGCGC CGCGCACCGA AGCCGACTTC
ATCGTGCTCG ACCCGCAGGC CACGCCGCTG CTCGCGCGCC GCACGAAGCG CGCGGATTCG
CTCGAGGAAC TGCTGTTCGC GTTCGCGCTG CTCGGCGACG ATCGCGCCGT GTACCGCACG
TACGCGGCCG GCCGGCTCGT GCACGAGCGC GGTGCCGCAC GCCGCGCCGC CGCTTGA
 
Protein sequence
MTQTAFRSQL LTFNGDPAQS SQAANHETDG LLIVDDGKVV AAGPYARLAP TLARDAVVHD 
LRDKLIVPGF IDTHIHYPQT DMIASPAPGL LPWLDKYTFP TERKFGDPEH AREVADFFVD
ELLACGTTSA LVYCTVHKQS ADALFAASAA RDVRMIAGKV LMDRNCPEFL RDTAQSGYDD
SAELIGRWHG NGRQLYALTP RFAPTSTEAQ LEACSELARR HPDVFVQSHV AENVDEVKWV
AELFPGHRSY LDIYDRYGLL RPRAVYGHCI HLDDEDRRRM AQTRTVVAHC PTSNFFLGSG
LFDFDKAGEY GVPVTLATDV GGGTSFSMLQ TMNEAHKVAR LSGHHLSATR MFWLATAGAA
HALDLADTVG TLAPRTEADF IVLDPQATPL LARRTKRADS LEELLFAFAL LGDDRAVYRT
YAAGRLVHER GAARRAAA