| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0857 |
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| Symbol | rph |
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| ID | 4308524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 941996 |
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| End bp | 942736 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638148655 |
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| Product | ribonuclease PH |
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| Protein accession | YP_772750 |
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| Protein GI | 115350911 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGTCTT CCCTGTCCCG CCCGAGCGGC CGTCGCGCCG ACGAACTGCG CAAGGTCGCC
CTCACGCGCC ACTACACGAA ACACGCCGAA GGCTCGGTCC TGGTCGAATT CGGCGACACC
AAGGTGATCT GCACCGCGAG CGTCGCCGAA CGCGTGCCCG AATTCCTGCG CGATCGCGGC
CAGGGCTGGC TGACGGCCGA ATACGGGATG CTGCCGCGTG CGACGCACAC GCGCAGCGAC
CGTGAAGCCG CACGCGGCAA GCAGACCGGC CGTACGCAGG AAATTCAGCG CCTGATCGGC
CGCGCGCTGC GCGCGGTGTT CGATCTCGAG GCGCTGGGCC CGCGCACGAT CCACATCGAC
TGCGACGTGA TCCAGGCCGA CGGCGGCACG CGCACGGCGA GCATCACCGG TGCGTTCGTC
GCCGCGCACG ACGCCGTGTC GAAGCTGATC GCGGCCGGCA AGCTCGCACG CTCGCCGATC
ACCGATCATG TCGCCGCGAT CTCGGTCGGC GTGTACGAAG GCGTGCCGTT GCTCGACCTC
GACTACGCGG AAGACTCGCG CTGCGACACC GACATGAACG TCGTGATGAC GGGCGCCGGC
GGCTTCGTCG AAGTCCAGGG CACCGCCGAA GGCGTACCGT TCTCGCGCGC CGAGATGAAT
GCGCTGCTCG ACCTCGCGCA AAGCGGGATC GGCCAGCTCG TGCAGTTGCA GAAGGACGTG
CTGGGCGCCG GCAATGTCTG A
|
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| Protein sequence | MTSSLSRPSG RRADELRKVA LTRHYTKHAE GSVLVEFGDT KVICTASVAE RVPEFLRDRG
QGWLTAEYGM LPRATHTRSD REAARGKQTG RTQEIQRLIG RALRAVFDLE ALGPRTIHID
CDVIQADGGT RTASITGAFV AAHDAVSKLI AAGKLARSPI TDHVAAISVG VYEGVPLLDL
DYAEDSRCDT DMNVVMTGAG GFVEVQGTAE GVPFSRAEMN ALLDLAQSGI GQLVQLQKDV
LGAGNV
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