Gene Bamb_0837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0837 
Symbol 
ID4311568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp924732 
End bp926042 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content67% 
IMG OID638148633 
Productrecombination factor protein RarA 
Protein accessionYP_772730 
Protein GI115350891 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0954108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGACC TGTTTCAAGT CGAGCCGCGC CGGCCGCTCG CCGAGGCGCT GCGGCCCAAG 
ACGCTCGCCG AGGTGATCGG CCAGACGCAT CTGCTGGGCG AAGGCAAGCC GCTGCGGCTC
GCGTTCGAAT CCGGCAAGCC GCATTCGATG ATCCTGTGGG GGCCGCCCGG CGTCGGCAAG
ACGACGCTCG CGCGCCTCAC CGCGCTCGCG TTCGACTGCG AGTTCATCGC GCTGTCCGCG
GTGCTCGGCG GCGTGAAGGA CATTCGCGAG TCGATGGAGC AGGCGAAGGA CACGCTGAAC
CGCACCGGCC GCCACACGAT CCTGTTCGTC GACGAAATCC ACCGCTTCAA CAAGGGGCAG
CAGGATGCGC TGCTGCCGTT CGTCGAGTCG GGGCTCGTGA CGTTCATCGG CGCGACGACC
GAGAATCCGA GCTTCGAAGT CAACTCGGCG CTGCTGTCGC GCGCGCAGGT GTACGTGCTG
CAGTCGCTGA GCGACGACGA GATGCGTCAG TTGCTCAAGC GTGCGCAGGA AATCGCGCTC
GACGGCCTCG CGTTCGACGA CAAGGCGGTC GATACGCTCA TCGGTTACGC GGACGGCGAC
GCGCGGCGCT TCCTGAACCT GCTCGAGCAG GCGCAGACGG CTGCTGCTTC CTCCCGAATC
ACGACCATCG ATGCCGATTT CGTCAGCAGC GCGATGACGC TGAACGCGCG GCGCTTCGAC
AAGGGCGGTG ACAATTTCTA CGATCAGATC TCGGCGCTGC ACAAGTCGGT GCGGGGTTCG
AGCCCGGACG GCGCGCTGTA CTGGTTCTGC CGGATGATCG ACGGCGGCGC GGATCCGAAA
TATCTCGCGC GCCGCATCGT GCGGATGGCG TGGGAAGACA TCGGTCTGGC CGACCCGCGC
GCGCTGCAGG TGGCGAACGA CGCGGCCGAG ACCTACGAGC GGCTCGGTTC CCCCGAAGGC
GAGCTGGCGC TCGGGCAAGC GGTGATCTAC CTCGCGTGCG CGGCGAAGAG CAACGCGGGC
TACAACGCGT TCAACCAGGC GATGGCGTTC GTCAAGCAGG ACAAGTCGCG CGAGGTGCCC
GTGCATCTGC GCAATGCGCC GACCAAGCTG ATGAAGGAAC TCGGCTACGG TCATGCGTAT
CGCTACGCGC ACGACGAGCC GAACGCCTAT GCGGCCGGCG AGACCTATCT GCCGGAAGGC
ATGCGCGAGC CGCGCTGGTA CAAGCCGGTG CCGCGCGGGC TCGAAGCGAA GATCGCCGAC
AAGCTCGCGT GGCTGCGCGA GCTCGACCGC GAGGCCGGCA AGAAGGACTG A
 
Protein sequence
MSDLFQVEPR RPLAEALRPK TLAEVIGQTH LLGEGKPLRL AFESGKPHSM ILWGPPGVGK 
TTLARLTALA FDCEFIALSA VLGGVKDIRE SMEQAKDTLN RTGRHTILFV DEIHRFNKGQ
QDALLPFVES GLVTFIGATT ENPSFEVNSA LLSRAQVYVL QSLSDDEMRQ LLKRAQEIAL
DGLAFDDKAV DTLIGYADGD ARRFLNLLEQ AQTAAASSRI TTIDADFVSS AMTLNARRFD
KGGDNFYDQI SALHKSVRGS SPDGALYWFC RMIDGGADPK YLARRIVRMA WEDIGLADPR
ALQVANDAAE TYERLGSPEG ELALGQAVIY LACAAKSNAG YNAFNQAMAF VKQDKSREVP
VHLRNAPTKL MKELGYGHAY RYAHDEPNAY AAGETYLPEG MREPRWYKPV PRGLEAKIAD
KLAWLRELDR EAGKKD