| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0795 |
|---|
| Symbol | trmB |
|---|
| ID | 4308978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 882511 |
|---|
| End bp | 883278 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638148590 |
|---|
| Product | tRNA (guanine-N(7)-)-methyltransferase |
|---|
| Protein accession | YP_772688 |
|---|
| Protein GI | 115350849 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
|---|
| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCACG ACGATCCGAA CGAAGCCGGC CTGCCGCCGG ACGACGCCGC CCTCCCCGAC
GAAGCCGCCG ACGGCGCCGA CGAAGTCAAT CCGCTGCACC ACCGCCGCAT CCGCAGCTTC
GTGACGCGCG CCGGCCGCGT GTCGACCGGC CAGCGCCGCG CGCTCGACGA GTTCGGCCCG
CGCTTCGTCG TCCCGTACGC AGCTGAAATT CCCGACTGGG ACGCCGTGTT CGGCCGCAGC
GCACCGCGCA TCCTCGAGAT CGGCTTCGGG ATGGGCGCGT CGACCGCGGA AATCGCCGCG
CACCGTCCGG GCGACGACTT CCTCGGCGTC GAAGTGCACG AGCCGGGCGT CGGCGCGCTG
CTGAAGCTGA TCGGCGAGCA GGACCTGCCG AACATCCGCA TCATCCAGCA CGACGCGGTC
GAAGTGCTCG AGCACATGCT CGCGCCGGAA AGCCTCGACG GCGTGCACAT CTTCTTCCCG
GATCCGTGGC ACAAGGCGCG CCACCACAAG CGCCGGCTGA TCCAGCCGCC GCTCGTCGCG
CACCTCGCAT CGCGCCTGAA GCCCGGCGCG TACCTGCATT GCGCGACCGA CTGGCAGAAC
TACGCGGAAC AGATGCTGGA AGTGCTCGGC GCCGAACCGT CGCTCGAAAA CACGGCCGCC
GACTACGCGC CGCGTCCCGA CTACCGCCCC ATCACGAAGT TCGAGCGGCG CGGGTTGCGG
CTCGGCCACG GCGTGTGGGA CCTGGTGTTC CGCAAGCGCG CCGGCTGA
|
|---|
| Protein sequence | MMHDDPNEAG LPPDDAALPD EAADGADEVN PLHHRRIRSF VTRAGRVSTG QRRALDEFGP
RFVVPYAAEI PDWDAVFGRS APRILEIGFG MGASTAEIAA HRPGDDFLGV EVHEPGVGAL
LKLIGEQDLP NIRIIQHDAV EVLEHMLAPE SLDGVHIFFP DPWHKARHHK RRLIQPPLVA
HLASRLKPGA YLHCATDWQN YAEQMLEVLG AEPSLENTAA DYAPRPDYRP ITKFERRGLR
LGHGVWDLVF RKRAG
|
|---|
| |