Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0791 |
Symbol | |
ID | 4309507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 878876 |
End bp | 880267 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638148586 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_772684 |
Protein GI | 115350845 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.680878 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCCG GTTCTGCCGA CACGATGTTC CGTCCCGATT TGCTCGCGAA GTACGGCGCG AACGGGCCGC GCTATACGTC CTACCCTACC GCGCTGCAGT TCCGCGACGA TTTCGACCCG GCCGACTACC TGCGTGCCGC GCGCGATCCC GGCGCGTCGT CCAGCGATCT GTCGCTGTAC TTCCATATCC CGTTCTGCAA CACGGCCTGC TTCTATTGCG GCTGCAACAA GATCGCGACC AACAACCATC GCCGCGCGCG CCCGTATCTC GAGCAACTGA AACGGGAGCT GGCGCTGCAG GCCGCGCTGT TCGATCCCGC GCGCCCGGTC ACGCAGCTGC ACTGGGGCGG CGGCACGCCG ACCTTCCTGT CCGACGCCGA AATGGCCGAA CTGATGGCGA CCACCCGCGA TTATTTCGTG CTCGCGCCGG ACGCCGAGGC CGAGTTCTCG ATCGAGATCG ACCCGCGCAC GGTCACGCCC GCGCGGCTCG TCCACCTGCG CAACATCGGC TTCAACCGGC TGAGCCTCGG CGTGCAGGAT TTCGATCCGG TCGTGCAGCA GGCGATCAAC CGGATCCAGC CGCTCGCGAT GACGGCCGAT TTGATGTCCG CCGCGCGCGC GACGGGCTTC CATTCGGTCA GCGTCGACCT GATCTACGGG CTGCCGCACC AGACGGTCGC CGTGTTCGCG CGCACGCTCG AGACGATCAT CGAACTCGCG CCGGACCGCC TGTCCGTATT CGGCTACGCG CACATGCCGC ACCTGTTCAA GATGCAGCGG CAGATCGACG ACGCGACGCT GCCGCCGCCC GAAACGCGCA TCGCGCTGCT CGGCCTGGCG ATCGACATGC TGACGTCAGC CGGCTACGTG TACATCGGGA TGGATCACTT CGCGCGGCCA ACCGACGAAC TCGTGCGCGC GCAGCGCAAC GGCACGCTGC AGCGCAATTT CCAGGGCTAC AGCACGCGCG CGGATACCGA CCTGATCGGT TTCGGCGTGT CGTCGATCGG CAAGGTCGGC GACGTCTACG CGCAGAACGC GAAGGATCTG CCGGCCTACG GCGCCGCGCT CGACGCGGGC CGGCTGCCGA TCGCGCGCGG CGTGCGGCTC ACGGCCGACG ACCGGCTGCG CCGCGACGTG ATCACGCAGC TGATGTGCAA CCTCGAATTG CCGTTCTCGC ATATCGAGGC GGCGCACGGG ATCCGCTTCG CCGATCACTT CGCGCGCGAG CTCGACGCGC TGCGCGGGTT CGAGCAGGAC GGGCTGCTGA CGATCGCCGG CGACCGCCTG ACGATTCTCC CGGCCGGCCG GATGGTCGTG CGCAACATCG CGATGGCGTT CGACGCCTAC CTCGGCCGGA CGCCGCGCCA GCGCTATTCG CGCACCGTCT GA
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Protein sequence | MSSGSADTMF RPDLLAKYGA NGPRYTSYPT ALQFRDDFDP ADYLRAARDP GASSSDLSLY FHIPFCNTAC FYCGCNKIAT NNHRRARPYL EQLKRELALQ AALFDPARPV TQLHWGGGTP TFLSDAEMAE LMATTRDYFV LAPDAEAEFS IEIDPRTVTP ARLVHLRNIG FNRLSLGVQD FDPVVQQAIN RIQPLAMTAD LMSAARATGF HSVSVDLIYG LPHQTVAVFA RTLETIIELA PDRLSVFGYA HMPHLFKMQR QIDDATLPPP ETRIALLGLA IDMLTSAGYV YIGMDHFARP TDELVRAQRN GTLQRNFQGY STRADTDLIG FGVSSIGKVG DVYAQNAKDL PAYGAALDAG RLPIARGVRL TADDRLRRDV ITQLMCNLEL PFSHIEAAHG IRFADHFARE LDALRGFEQD GLLTIAGDRL TILPAGRMVV RNIAMAFDAY LGRTPRQRYS RTV
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