Gene Bamb_0791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0791 
Symbol 
ID4309507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp878876 
End bp880267 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content68% 
IMG OID638148586 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_772684 
Protein GI115350845 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR00538] oxygen-independent coproporphyrinogen III oxidase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.680878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCCG GTTCTGCCGA CACGATGTTC CGTCCCGATT TGCTCGCGAA GTACGGCGCG 
AACGGGCCGC GCTATACGTC CTACCCTACC GCGCTGCAGT TCCGCGACGA TTTCGACCCG
GCCGACTACC TGCGTGCCGC GCGCGATCCC GGCGCGTCGT CCAGCGATCT GTCGCTGTAC
TTCCATATCC CGTTCTGCAA CACGGCCTGC TTCTATTGCG GCTGCAACAA GATCGCGACC
AACAACCATC GCCGCGCGCG CCCGTATCTC GAGCAACTGA AACGGGAGCT GGCGCTGCAG
GCCGCGCTGT TCGATCCCGC GCGCCCGGTC ACGCAGCTGC ACTGGGGCGG CGGCACGCCG
ACCTTCCTGT CCGACGCCGA AATGGCCGAA CTGATGGCGA CCACCCGCGA TTATTTCGTG
CTCGCGCCGG ACGCCGAGGC CGAGTTCTCG ATCGAGATCG ACCCGCGCAC GGTCACGCCC
GCGCGGCTCG TCCACCTGCG CAACATCGGC TTCAACCGGC TGAGCCTCGG CGTGCAGGAT
TTCGATCCGG TCGTGCAGCA GGCGATCAAC CGGATCCAGC CGCTCGCGAT GACGGCCGAT
TTGATGTCCG CCGCGCGCGC GACGGGCTTC CATTCGGTCA GCGTCGACCT GATCTACGGG
CTGCCGCACC AGACGGTCGC CGTGTTCGCG CGCACGCTCG AGACGATCAT CGAACTCGCG
CCGGACCGCC TGTCCGTATT CGGCTACGCG CACATGCCGC ACCTGTTCAA GATGCAGCGG
CAGATCGACG ACGCGACGCT GCCGCCGCCC GAAACGCGCA TCGCGCTGCT CGGCCTGGCG
ATCGACATGC TGACGTCAGC CGGCTACGTG TACATCGGGA TGGATCACTT CGCGCGGCCA
ACCGACGAAC TCGTGCGCGC GCAGCGCAAC GGCACGCTGC AGCGCAATTT CCAGGGCTAC
AGCACGCGCG CGGATACCGA CCTGATCGGT TTCGGCGTGT CGTCGATCGG CAAGGTCGGC
GACGTCTACG CGCAGAACGC GAAGGATCTG CCGGCCTACG GCGCCGCGCT CGACGCGGGC
CGGCTGCCGA TCGCGCGCGG CGTGCGGCTC ACGGCCGACG ACCGGCTGCG CCGCGACGTG
ATCACGCAGC TGATGTGCAA CCTCGAATTG CCGTTCTCGC ATATCGAGGC GGCGCACGGG
ATCCGCTTCG CCGATCACTT CGCGCGCGAG CTCGACGCGC TGCGCGGGTT CGAGCAGGAC
GGGCTGCTGA CGATCGCCGG CGACCGCCTG ACGATTCTCC CGGCCGGCCG GATGGTCGTG
CGCAACATCG CGATGGCGTT CGACGCCTAC CTCGGCCGGA CGCCGCGCCA GCGCTATTCG
CGCACCGTCT GA
 
Protein sequence
MSSGSADTMF RPDLLAKYGA NGPRYTSYPT ALQFRDDFDP ADYLRAARDP GASSSDLSLY 
FHIPFCNTAC FYCGCNKIAT NNHRRARPYL EQLKRELALQ AALFDPARPV TQLHWGGGTP
TFLSDAEMAE LMATTRDYFV LAPDAEAEFS IEIDPRTVTP ARLVHLRNIG FNRLSLGVQD
FDPVVQQAIN RIQPLAMTAD LMSAARATGF HSVSVDLIYG LPHQTVAVFA RTLETIIELA
PDRLSVFGYA HMPHLFKMQR QIDDATLPPP ETRIALLGLA IDMLTSAGYV YIGMDHFARP
TDELVRAQRN GTLQRNFQGY STRADTDLIG FGVSSIGKVG DVYAQNAKDL PAYGAALDAG
RLPIARGVRL TADDRLRRDV ITQLMCNLEL PFSHIEAAHG IRFADHFARE LDALRGFEQD
GLLTIAGDRL TILPAGRMVV RNIAMAFDAY LGRTPRQRYS RTV