| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0711 |
|---|
| Symbol | |
|---|
| ID | 4308999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 790489 |
|---|
| End bp | 792051 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638148506 |
|---|
| Product | molybdopterin dehydrogenase, FAD-binding |
|---|
| Protein accession | YP_772604 |
|---|
| Protein GI | 115350765 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A |
|---|
| TIGRFAM ID | [TIGR02963] xanthine dehydrogenase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGC CGATCCGCTT CTACCATCGT CACGCGGTCC GCGAAGTCAG CGGCGCGGAC
GTCACCCGCA CCGTGCTGCA GTACCTGCGC GAGGATGCGC ACTGCACCGG CACGAAGGAA
GGCTGCGCGG AAGGCGACTG CGGCGCGTGC ACGGTCGTCG TCGGCGAGCT GACCGACGCG
GGCACGGTCG CGTTCAAGGC CGTCAACGCC TGCATCCAGT TCCTGCCGAC GCTCGACGGC
CGCGCGCTGC TGACGGTTGA AGACCTGCGC CAGCCGGACG GTTCGCTGCA CCCGGTGCAG
CAGGCGATGG TCGATTGCCA CGGGTCGCAA TGCGGGTTCT GCACGCCCGG CTTCGTGATG
TCGATGTGGG CGTTGTATGA GAAGCACGGC CACGAGGGTT GCGGCAGCGC GTGCGCGAAG
GCGAAGGACG TGCCGACGCG CACCGAGATC GCCGATGCGT TGACGGGCAA CCTGTGCCGC
TGCACCGGCT ATCGCCCGAT CGTCGACGCG GCCGTCCAGA TGTTCAATGC GACCGGCGAA
GGTGCGTCGC AGCCGGTAGC CCCGGTCGAC ACGGCCGCGC TTGCCCGCAC GCTCGCGTCG
CTCAAGCGTG ACGACACGTT CGACTACACG ACGAGCGACG GCGCGCGCTT CGCGGCGCCG
CGCACGCTCG ACGCACTGGC CGCGCTGAAG ATCGAGCGGC CCGACGCGCG CATTCTCGCG
GGCAGCACCG ACATCGGCCT GTGGGTCACC AAGCAGTTGC GCCGGCTCGA CGATCTGATC
TACGTCGGCC AGATCGCCGA ACTGCAGACC ATCGCGCACG GCGACGACTG GATCGAGATC
GGCGCGGGCG TGACGCTCGA GAACGCGTAT GCGGCACTCG CCGGCACGTA TCCGGAGCTG
ACCGAGATGT GGAAGCGCTT CGCGTCGCTG CCGATCCGCA ACGCGGGGAC GATGGGCGGC
AACGTCGCGA ACGGCTCGCC GATCGGCGAC TCGATGCCGG GCCTGATCGC GCTCGGTGCG
CGCGTCGTGC TGCGCGGCGG CGACACGGTG CGCGAGCTGC CGCTCGAGGC GCTCTACACC
GGCTATCAGC AGAAGGACAT GGCGCCGCAC GAATTCGTCG TCAGCCTGAA GGTGCCGACT
CGCACCGGCG CGCGCGCGAA GCTGCAGTTC CGCACCTACA AGGTGTCGAA ACGGTTCGAC
TCCGACATCT CGGCTGTGTG CGCGGCGTTC GCGTTCATCG CGGACGGCGA CACGATCCGC
GAGCCGCGCA TCGCGTTCGG CGGGATGGCC GCGACGCCGA AGCGCGCGAC GCACACGGAA
GCCGTGCTCG ACGGCGCGCA GTGGCACGAA GCCACCGCGC AGGCCGCGAT GCAGGCGCTC
GAGCGCGACT ATCAGCCGCT CTCTGACATG CGCGCGACGA GCACGTATCG CCTCGATGCC
GCAAAGAACC TGGCGTATCG ATTCTGGCTG GAGACGCGCC CGCACGACCC GCTGCCGCCG
CAAGCCGTGA ATGTGCGCGA AGTGGCCGCC GAAGCCGGCG CCGACGCCGA CGCGCGCGTC
TGA
|
|---|
| Protein sequence | MSEPIRFYHR HAVREVSGAD VTRTVLQYLR EDAHCTGTKE GCAEGDCGAC TVVVGELTDA
GTVAFKAVNA CIQFLPTLDG RALLTVEDLR QPDGSLHPVQ QAMVDCHGSQ CGFCTPGFVM
SMWALYEKHG HEGCGSACAK AKDVPTRTEI ADALTGNLCR CTGYRPIVDA AVQMFNATGE
GASQPVAPVD TAALARTLAS LKRDDTFDYT TSDGARFAAP RTLDALAALK IERPDARILA
GSTDIGLWVT KQLRRLDDLI YVGQIAELQT IAHGDDWIEI GAGVTLENAY AALAGTYPEL
TEMWKRFASL PIRNAGTMGG NVANGSPIGD SMPGLIALGA RVVLRGGDTV RELPLEALYT
GYQQKDMAPH EFVVSLKVPT RTGARAKLQF RTYKVSKRFD SDISAVCAAF AFIADGDTIR
EPRIAFGGMA ATPKRATHTE AVLDGAQWHE ATAQAAMQAL ERDYQPLSDM RATSTYRLDA
AKNLAYRFWL ETRPHDPLPP QAVNVREVAA EAGADADARV
|
|---|
| |