Gene Bamb_0676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0676 
Symbol 
ID4308553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp756829 
End bp757338 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content63% 
IMG OID638148471 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_772569 
Protein GI115350730 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.306493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTCGA ATAAAGCTCG TCTGGCCCTG GCCGTGATGA TGATCAGCGC GCTCGCAGCG 
TGTAAGTCGG GCGTGAAGCT CGACGACAAG ACCAACGCTG GTGCGGTGAG CACGCAGCCG
AGCGCCGACA ACGTCGCGCA AGTGAACGTC GATCCGCTGA ACGATCCGAA CAGCCCGCTC
GCGAAGCGCA GCATCTACTT CGACTTCGAC AGCTATTCGG TGAAGGACGA GTATCAGCCG
CTGATGCAGC AGCACGCTCA GTACCTGAAG AGCCACCCGC AGCGTCACGT GCTGATCCAG
GGCAACACCG ACGAACGCGG CACGAGCGAG TACAACCTCG CGCTGGGCCA GAAGCGTGCG
GAAGCTGTCC GCCGCGCGAT GGCACTGCTC GGCGTGAACG ACTCGCAGAT GGAAGCCGTG
AGCCTCGGCA AGGAAAAGCC GCAAGCATCG GGCCACGACG AAGCATCGTG GGCGCAGAAC
CGTCGCGCCG ACCTCGTCTA CCAGCAGTAA
 
Protein sequence
MMSNKARLAL AVMMISALAA CKSGVKLDDK TNAGAVSTQP SADNVAQVNV DPLNDPNSPL 
AKRSIYFDFD SYSVKDEYQP LMQQHAQYLK SHPQRHVLIQ GNTDERGTSE YNLALGQKRA
EAVRRAMALL GVNDSQMEAV SLGKEKPQAS GHDEASWAQN RRADLVYQQ