Gene Bamb_0591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0591 
SymbolmnmA 
ID4308538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp663887 
End bp665041 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content67% 
IMG OID638148385 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_772484 
Protein GI115350645 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAGC GCCGTGTAGT AGTGGGCATG TCGGGCGGCG TCGATTCGTC GGTGACCGCG 
TGGCTGCTGA AGGAACAAGG GTACGACGTG GTCGGCCTGT TCATGAAGAA CTGGGAAGAC 
GACGACGACG GCGAATACTG CTCGACGCGC CAGGACTGGA TCGACGTCGT GTCGGTTGCT 
GACCTGATCG GCATCGACGT GGAAGCGGTG AACTTCGCGG CCGAATACAA GGACCGCGTG 
TTCGCCGAAT TCCTGCGCGA ATACTCGGCG GGCCGCACGC CGAACCCGGA CGTGCTGTGC 
AACGCCGAGA TCAAGTTCAA GGCGTTCCTC GATCACGCAA TGTCGCTCGA CGCGGAAATG 
ATCGCGACCG GCCACTACGC GCGCGTGCGC GAGCGCGACG GTCGCTTCGA ACTGCTGAAG 
GCGTTCGATC ATACGAAAGA CCAGTCGTAC TTCCTGCACC GGCTGAACCA GGCGCAACTG 
TCGAAGACGA TGTTCCCGCT CGGCGAGATC CCGAAGACGA AGGTGCGCGA GATCGCCGCG 
CAGATCGGCC TGCCGAACGC GAAGAAGAAG GACTCGACGG GCATCTGCTT CATCGGGGAA 
CGGCCGTTCC GCGACTTCCT GAACCGCTAT CTTCCGACGA AACCGGGCCC GATGAAGACG 
CCGGACGGCA AGGTGATCGG CGAGCACATC GGCCTCGCGT TCTACACGTT CGGCCAGCGC 
AAGGGCATCG GCCTCGGCGG CAGCAAGGAC GGCAGCGGCG AACCGTGGTT CGTCGCCGCG 
AAGGACATCG CGTCGAACAC GCTGTACGTC GTGCAGGGCC ACGACCATCC ATGGCTGCTG 
TCCCGCCAGC TCGTCGCCGG CAACGTAAGC TGGGTCGCGG GCGAGCCGCC GGCCGATGGC 
TTCTCGTGCG GCGCGAAGAC GCGCTACCGG CAGGCCGACG CCGCGTGTTC CTTCGGCCGC 
GCCGACGGCG AGCGCTTCTC GCTCGCGTTC GACGACGCGC AATGGGCGGT GACGCCCGGC 
CAGTCGGCCG TGCTGTACGA CGGCGAGATC TGCCTGGGCG GCGGCATCAT CGAGTTCGCG 
GCCACCGGCC AACCCGGCCA GACGGCGCCG GCACCGGCGG CGGGCCACAC CGGCGCGCTG 
GCCGAAGCAC GCTGA
 
Protein sequence
MTKRRVVVGM SGGVDSSVTA WLLKEQGYDV VGLFMKNWED DDDGEYCSTR QDWIDVVSVA 
DLIGIDVEAV NFAAEYKDRV FAEFLREYSA GRTPNPDVLC NAEIKFKAFL DHAMSLDAEM 
IATGHYARVR ERDGRFELLK AFDHTKDQSY FLHRLNQAQL SKTMFPLGEI PKTKVREIAA 
QIGLPNAKKK DSTGICFIGE RPFRDFLNRY LPTKPGPMKT PDGKVIGEHI GLAFYTFGQR 
KGIGLGGSKD GSGEPWFVAA KDIASNTLYV VQGHDHPWLL SRQLVAGNVS WVAGEPPADG 
FSCGAKTRYR QADAACSFGR ADGERFSLAF DDAQWAVTPG QSAVLYDGEI CLGGGIIEFA 
ATGQPGQTAP APAAGHTGAL AEAR