Gene Bamb_0577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_0577 
Symbol 
ID4308970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp649435 
End bp650676 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content65% 
IMG OID638148371 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_772470 
Protein GI115350631 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.133514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCG AACCCAGTTC CAAGCCTGTT TTCCCGATCA CCGACGAAGT CCGTCATGCG 
CTCGCCGTCA CGAAGCGCGG CGTCGACGAA CTGCTGATCG AGGAAGAGTT CGCGCAGAAG
CTCGCGCGCA GCGCGGCCAC CGGCACGCCG CTGCGCATCA AGCTCGGCCT CGACCCGACC
GCGCCCGACA TCCACATCGG CCATACGGTC GTGCTGAACA AGATGCGTCA GCTGCAGGAC
CTCGGTCATA CCGTGATCTT CCTGATCGGC GATTTCACGT CGCTGATCGG CGATCCGTCG
GGCCGCAACG CGACGCGTCC GCCGCTCACG CGCGAACAGA TCGAATCGAA CGCGAAGACC
TATTTCGAAC AGGCCGCGCT CGTGCTCGAC CGCGAAAAGA CCGAGATCCG CTACAACAGC
GAATGGTCGA TGCCGCTCGG CGCGGACGGG ATGATCAAGC TCGCGTCGCG CTACACGGTC
GCGCGGATCC TCGAGCGCGA GGACTTCACG AAGCGTTTCC AGGGCGGCGT GCCGATCTCG
ATCCACGAAT TCCTGTACCC GCTGATGCAG GGCTACGACT CGGTCGCGCT GAACGCCGAT
CTCGAGCTCG GCGGCACCGA CCAGAAGTTC AACCTGCTGG TCGGCCGCGA ACTGCAGAAG
CAGTACGGCC AGGAACAGCA GTGCATCCTG ACGATGCCGC TGCTCGAAGG CCTCGACGGC
GTCGAGAAGA TGTCGAAGTC GAAGGGCAAC TACGTCGGCA TCAGCGAGAA GCCGACCGAC
ATGTTCGGCA AGCTGATGAG CATCTCGGAC ACGCTGATGT GGCGTTACTT CGAACTGCTG
TCGTTCCGCA GCCTCGACGA GATCGCCGGC TTCAAGCGCG ACGCCGAAGG CGGCCGCAAC
CCGCGCGACT TCAAGGTGCT GCTCGCGCAG GAAATCGTCG CGCGCTTCCA CTCGCAGGCC
GACGCCGAGC GTGCGCTCGA CGACTTCAAC CACCGCGCGA AGGGCGGCGT GCCGGACGAC
ATCCCGTCGG TCACGCTCGC GGGCGCGCCG CTCGCGATCG GCCAGTTGCT GAAGCAGGCC
GGCCTCGTGC CGTCGACGAG CGAAGCGCTG CGCAACATCG AGCAGGGCGG CGTGAAGATC
GACGGTGCGA CCGTGTCCGA CAAGGGCCTG AAGGTCGAGG CCGGCGAGTT CGTCGTCCAG
GTCGGCAAGC GCCGCTTCGC GCGCGTCACG CTGAGCGCAT GA
 
Protein sequence
MSTEPSSKPV FPITDEVRHA LAVTKRGVDE LLIEEEFAQK LARSAATGTP LRIKLGLDPT 
APDIHIGHTV VLNKMRQLQD LGHTVIFLIG DFTSLIGDPS GRNATRPPLT REQIESNAKT
YFEQAALVLD REKTEIRYNS EWSMPLGADG MIKLASRYTV ARILEREDFT KRFQGGVPIS
IHEFLYPLMQ GYDSVALNAD LELGGTDQKF NLLVGRELQK QYGQEQQCIL TMPLLEGLDG
VEKMSKSKGN YVGISEKPTD MFGKLMSISD TLMWRYFELL SFRSLDEIAG FKRDAEGGRN
PRDFKVLLAQ EIVARFHSQA DAERALDDFN HRAKGGVPDD IPSVTLAGAP LAIGQLLKQA
GLVPSTSEAL RNIEQGGVKI DGATVSDKGL KVEAGEFVVQ VGKRRFARVT LSA