Gene Bamb_0547 details

Gene Information

• Locus tag: Bamb_0547
• ID: 4308688
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 612828
• End bp: 613496
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 638148341
• Product: MotA/TolQ/ExbB proton channel
• Protein accession: YP_772440
• Protein GI: 115350601
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0811] Biopolymer transport proteins

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.232514
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCATTC CCACCGGCGT TGTCCACTAC CTCGAAAGCG GCGATGCGAT CACGCACGCC 
GTCGCCTATG TGCTGCTGGC GATGTCCGTC GCCAGCTGGT GCTTTCTCCT GATGAAGGCC 
TGGCTGCTGG TCCGCGCGAA GCGGCAGGGG CCGCGCGCGC TCGCCGCGTT CTGGCGCGCG 
GCGTCGCTCG ACGCGGGCAT CGACGCGCTC GCCGGCGCCG ATCGCGAGCG CGTGTTCGTG 
CCGCTCGCCG AAGCCGCGCG CGACGCGGCC GACGAACACG ATCCGGCCGC GCTGGCCGCG 
CGCGTCGAGC GCAGCGAACG CGTGCTGCGC GCGCTGCGTC ACGCAATGCT GCGCTCGCAG 
CGGCGTCTCG AGTTCGGTCA GGTGCTGCTC GCGTCGATCG GCAGCACCGC GCCGTTCGTC 
GGGCTGCTCG GCACCGTGTG GGGCATCTAT CACGCGCTCG GCAGCATCGC CGCGAGCGGA 
CAGGCGCAGA TCGAGAACGT CGCGGGGCCG GTCGGCGAGG CGCTGATCAT GACCGCGTTC 
GGGCTCGTCG TCGCGATTCC CGCGGTGCTT GCCTACAACA TCCTCGGGCG GCTCGTGCGC 
CAACTCGCCG AGGAACTCGA CGGCTTCGCG CGCGACCTGC ACGTATTCGT GTGCGCGCAG 
GGCGCCTGA 

 

Protein sequence

MAIPTGVVHY LESGDAITHA VAYVLLAMSV ASWCFLLMKA WLLVRAKRQG PRALAAFWRA 
ASLDAGIDAL AGADRERVFV PLAEAARDAA DEHDPAALAA RVERSERVLR ALRHAMLRSQ 
RRLEFGQVLL ASIGSTAPFV GLLGTVWGIY HALGSIAASG QAQIENVAGP VGEALIMTAF 
GLVVAIPAVL AYNILGRLVR QLAEELDGFA RDLHVFVCAQ GA